RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 PIK3R1P27986 724 aa14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 NPY2RP49146 381 aa14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 CCL14Q16627 93 aa14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 ZNF280DQ6N043 979 aa14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 ESRP1Q6NXG1 681 aaKnown RBP14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 SLC30A9Q6PML9 568 aa14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 CNGB3Q9NQW8 809 aa14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 TRHDEQ9UKU6 1024 aa14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 INPP5FQ9Y2H2 1132 aa14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 ZNF638Q14966 1978 aaKnown RBP14.27□□□□□ -0.12
ATP2C1-201ENST00000328560 CCDC189A1A4V9 331 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 TMEM233B4DJY2 109 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 AHSGP02765 367 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 THP07101 528 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 TFEBP19484 476 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 CRYBB1P53674 252 aaPredicted RBP14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 FSTL5Q8N475 847 aaPredicted RBP14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 SLC9A7Q96T83 725 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 KLHL4Q9C0H6 718 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 CYP4F12Q9HCS2 524 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 XPR1Q9UBH6 696 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 ZDHHC2Q9UIJ5 367 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 UNCXA6NJT0 531 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 BUD23O43709 281 aaKnown RBP14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 JUNP05412 331 aaKnown RBP14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 CRABP2P29373 138 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 RPL14P50914 215 aaKnown RBP14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 HUNKP57058 714 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 MED21Q13503 144 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 MMEL1Q495T6 779 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 GNASQ5JWF2 1037 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 KCTD11Q693B1 232 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 AAGABQ6PD74 315 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 ZC3HC1Q86WB0 502 aaKnown RBP14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 SCAMP5Q8TAC9 235 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 PPP2R3CQ969Q6 453 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 NTAN1Q96AB6 310 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 NXNL1Q96CM4 212 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 RCN3Q96D15 328 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 HDAC11Q96DB2 347 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 ELMO2Q96JJ3 720 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 GCNAQ96QF7 691 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 CHST12Q9NRB3 414 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 SLC38A7Q9NVC3 462 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 OXSMQ9NWU1 459 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 GTSE1Q9NYZ3 720 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 SLC2A6Q9UGQ3 507 aa14.27□□□□□ -0.13
ATP2C1-201ENST00000328560 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.138e-7■■■■■ 85.6
ATP2C1-201ENST00000328560 HDAC3O15379 428 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 MTSS1O43312 755 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 B3GAT3O94766 335 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 POMCP01189 267 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 GALNT2Q10471 571 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 CNGA3Q16281 694 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 FOXB2Q5VYV0 432 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 IL31Q6EBC2 164 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 ACAD11Q709F0 780 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 ATPAF2Q8N5M1 289 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 UPF1Q92900 1129 aaKnown RBP eCLIP14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 MYLPFQ96A32 169 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 TMA16Q96EY4 203 aaKnown RBP14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 PRDM16Q9HAZ2 1276 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 MAGEB16A2A368 324 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 NEMP2A6NFY4 417 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 STX16-NPEPL1H3BU86 382 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 GABRDO14764 452 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 BRCC3P46736 316 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 FKBP1BP68106 108 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 IRX1P78414 480 aaPredicted RBP14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 MRPS22P82650 360 aaKnown RBP14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 DLG1Q12959 904 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 NOMO2Q5JPE7 1267 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 PGM2L1Q6PCE3 622 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 ZNF354CQ86Y25 554 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 PPP1R10Q96QC0 940 aaKnown RBP14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 SFMBT1Q9UHJ3 866 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 ACOT9Q9Y305 439 aa14.26□□□□□ -0.13
ATP2C1-201ENST00000328560 TRIP12Q14669 1992 aaPredicted RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 SHROOM3Q8TF72 1996 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 TNPO2O14787 897 aaKnown RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 THRAP10827 490 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 GABRB3P28472 473 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 CHRNA4P43681 627 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 LHX1P48742 406 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 PLK1P53350 603 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 SLC12A2P55011 1212 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 CSE1LP55060 971 aaKnown RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 CACNB2Q08289 660 aaPredicted RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 FSCN1Q16658 493 aaKnown RBP14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 LIPMQ5VYY2 423 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 FSD1LQ9BXM9 530 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 FLRT1Q9NZU1 646 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 ST3GAL5Q9UNP4 418 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 RAP2CQ9Y3L5 183 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 CAPN8A6NHC0 703 aa14.25□□□□□ -0.13
ATP2C1-201ENST00000328560 ERI2A8K979 691 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms