RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 GNA12Q03113 381 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 FSCBQ5H9T9 825 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 MARC1Q5VT66 337 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 Q6ZNB5 142 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 CCDC149Q6ZUS6 474 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 TEX26Q8N6G2 289 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 FICDQ9BVA6 458 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 SLC46A2Q9BY10 475 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 CNOT10Q9H9A5 744 aaKnown RBP18.74■□□□□ 0.59
USP39-201ENST00000323701 CHRAC1Q9NRG0 131 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 STOML2Q9UJZ1 356 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 CCDC78A2IDD5 438 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 PER2O15055 1255 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 PRAMEF11O60813 436 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 ALDH1A2O94788 518 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 PGAM1P18669 254 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 ATP5DP30049 168 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 IFNAR2P48551 515 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 RENBPP51606 427 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 YBEYP58557 167 aaPredicted RBP18.73■□□□□ 0.59
USP39-201ENST00000323701 SLC20A2Q08357 652 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 MICALCLQ6ZW33 695 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 LRRC6Q86X45 466 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 ANKRD42Q8N9B4 389 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 ATP2A3Q93084 1043 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 MFSD3Q96ES6 412 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 LBHD1Q9BQE6 289 aaPredicted RBP18.73■□□□□ 0.59
USP39-201ENST00000323701 RPS6KL1Q9Y6S9 549 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 GBF1Q92538 1859 aa18.73■□□□□ 0.59
USP39-201ENST00000323701 MTCL1Q9Y4B5 1905 aaKnown RBP18.73■□□□□ 0.59
USP39-201ENST00000323701 HMX2A2RU54 273 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 GOLGA8RI6L899 631 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 CKMP06732 381 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 IL10RBQ08334 325 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 MTA1Q13330 715 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 PRPSAP1Q14558 356 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 PCSK7Q16549 785 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 ANO4Q32M45 955 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 RABGAP1LQ5R372 815 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 CXorf57Q6NSI4 855 aaKnown RBP18.72■□□□□ 0.59
USP39-201ENST00000323701 WFDC5Q8TCV5 224 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 FATE1Q969F0 183 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 IMP4Q96G21 291 aaKnown RBP18.72■□□□□ 0.59
USP39-201ENST00000323701 SERAC1Q96JX3 654 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 TBL1YQ9BQ87 522 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 PPCSQ9HAB8 311 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 MAN1C1Q9NR34 630 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 DONSONQ9NYP3 566 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 AAR2Q9Y312 384 aaKnown RBP18.72■□□□□ 0.59
USP39-201ENST00000323701 PSAT1Q9Y617 370 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 MYLKQ15746 1914 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 C5orf67F2Z3F1 127 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 GFRA2O00451 464 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 CD86P42081 329 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 ITKQ08881 620 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 SHHQ15465 462 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 PPM1LQ5SGD2 360 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 POTEHQ6S545 545 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 KDELC1Q6UW63 502 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 RIN3Q8TB24 985 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 ARRDC2Q8TBH0 407 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 MRPS31Q92665 395 aaKnown RBP18.72■□□□□ 0.59
USP39-201ENST00000323701 NSMCE3Q96MG7 304 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 SPON2Q9BUD6 331 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 SLC25A51Q9H1U9 297 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 C12orf65Q9H3J6 166 aaKnown RBP18.72■□□□□ 0.59
USP39-201ENST00000323701 CERS4Q9HA82 394 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 CCL26Q9Y258 94 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 NOTCH4Q99466 2003 aa18.72■□□□□ 0.59
USP39-201ENST00000323701 EYSQ5T1H1 3165 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 ZCWPW2A0A1B0GU75 182 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 CLDN11O75508 207 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 ANXA9O76027 345 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 INHBAP08476 426 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 GSTA2P09210 222 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 ERVK-10P10266 1014 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 KRT4P19013 534 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 BMPR2Q13873 1038 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 LBRQ14739 615 aaKnown RBP18.71■□□□□ 0.59
USP39-201ENST00000323701 SLC5A9Q2M3M2 681 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 ZNF697Q5TEC3 545 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 NAPEPLDQ6IQ20 393 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 TMEM135Q86UB9 458 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 SLC26A11Q86WA9 606 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 SHKBP1Q8TBC3 707 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 INTS9Q9NV88 658 aaKnown RBP18.71■□□□□ 0.59
USP39-201ENST00000323701 BFARQ9NZS9 450 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 ACTL7BQ9Y614 415 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 A0A1B0GVM2 712 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 TCAF2A6NFQ2 919 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 MOSPD3O75425 235 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 NEBLO76041 1014 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 PBX2P40425 430 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 WNT3AP56704 352 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 NTHL1P78549 312 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 CDH17Q12864 832 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 IL31Q6EBC2 164 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 RANBP10Q6VN20 620 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 ASAH2Q9NR71 780 aa18.71■□□□□ 0.59
USP39-201ENST00000323701 CFAP97Q9P2B7 532 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms