RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 GMIPQ9P107 970 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 OR12D3Q9UGF7 316 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 PHTF1Q9UMS5 762 aa13.31□□□□□ -0.28
CPNE1-201ENST00000317677 FAM92AA1XBS5 289 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 TMEM247A6NEH6 219 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 SERPINB3P29508 390 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 GRIA1P42261 906 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 GLUD2P49448 558 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 ACADVLP49748 655 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 EMP3P54852 163 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 RAB15P59190 212 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 GPR17Q13304 367 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 CFAP157Q5JU67 520 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 HEATR6Q6AI08 1181 aaKnown RBP13.3□□□□□ -0.28
CPNE1-201ENST00000317677 SLC15A3Q8IY34 581 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 RIBC1Q8N443 379 aaPredicted RBP13.3□□□□□ -0.28
CPNE1-201ENST00000317677 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
CPNE1-201ENST00000317677 DEPDC1BQ8WUY9 529 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 RABGEF1Q9UJ41 708 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 TEX264Q9Y6I9 313 aa13.3□□□□□ -0.28
CPNE1-201ENST00000317677 NYNRINQ9P2P1 1898 aaKnown RBP13.3□□□□□ -0.28
CPNE1-201ENST00000317677 A0A0A0MRY4 1105 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 F5H423 210 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 KIAA0355O15063 1070 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 EDF1O60869 148 aaKnown RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 PIAS1O75925 651 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 CBX6O95503 412 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 CPB1P15086 417 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 RAG1P15918 1043 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 PORP16435 677 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 ELK3P41970 407 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 RAP1GDS1P52306 607 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 GSTM4Q03013 218 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 DCTN2Q13561 401 aaKnown RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 SEMA5AQ13591 1074 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 LRIT3Q3SXY7 679 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 MANEALQ5VSG8 457 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 CNKSR3Q6P9H4 555 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 ADGRG6Q86SQ4 1221 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 MAML1Q92585 1016 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 SPATA13Q96N96 652 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 OSBPL2Q9H1P3 480 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 FAIMQ9NVQ4 179 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 KIAA1671Q9BY89 1806 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 RANBP2P49792 3224 aaKnown RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 TRIM43BA6NCK2 446 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 RNF103O00237 685 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 TPD52L2O43399 206 aaKnown RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 PAGE1O75459 146 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 SUPT3HO75486 399 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 PARNO95453 639 aaKnown RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 C1QAP02745 245 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 APRTP07741 180 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 HAPLN1P10915 354 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 CDK4P11802 303 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 ETS2P15036 469 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 HOXD12P35452 270 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 MAGEA3P43357 314 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 TAF1BQ53T94 588 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 MSANTD2Q6P1R3 559 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 ZNF449Q6P9G9 518 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 DENND5BQ6ZUT9 1274 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 CLNKQ7Z7G1 428 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 PDIK1LQ8N165 341 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 PYROXD1Q8WU10 500 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 BADQ92934 168 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 TRIM43Q96BQ3 446 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 PTCD3Q96EY7 689 aaKnown RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 TRIM62Q9BVG3 475 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 TUBA8Q9NY65 449 aaPredicted RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 TBK1Q9UHD2 729 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 ZFP69BQ9UJL9 534 aa13.29□□□□□ -0.28
CPNE1-201ENST00000317677 MRPL42Q9Y6G3 142 aaKnown RBP13.29□□□□□ -0.28
CPNE1-201ENST00000317677 EXOC1LA0A1B0GW35 172 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 KANSL1LA0AUZ9 987 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 HGSO14964 777 aaPredicted RBP13.28□□□□□ -0.28
CPNE1-201ENST00000317677 ATF6P18850 670 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 NEK3P51956 506 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 DEFB103AP81534 67 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 XIAPP98170 497 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 DUSP4Q13115 394 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 PDK1Q15118 436 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 BRMS1LQ5PSV4 323 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 C14orf80Q86SX3 495 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 MON1AQ86VX9 555 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 ZNF567Q8N184 647 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 ARHGAP24Q8N264 748 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 MCUQ8NE86 351 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 GAB3Q8WWW8 586 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 RNF34Q969K3 372 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 SLC39A13Q96H72 371 aa13.28□□□□□ -0.28
CPNE1-201ENST00000317677 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms