RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 MXRA7P84157 204 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 SEPT6Q14141 434 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 FSTL4Q6MZW2 842 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 KCNMB4Q86W47 210 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 MTBPQ96DY7 904 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 TRIM55Q9BYV6 548 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 KCNK13Q9HB14 408 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 TMEM216Q9P0N5 145 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 MARCH2Q9P0N8 246 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 ARMCX1Q9P291 453 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.63□□□□□ -0.39
RNF4-201ENST00000314289 CCL22O00626 93 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 WFS1O76024 890 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 CSPG5O95196 566 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 MYL2P10916 166 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 SERPINB9P50453 376 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 SLC10A7Q0GE19 358 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 CTBP1Q13363 440 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 PRPSAP1Q14558 356 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 RFWD3Q6PCD5 774 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 TMEM135Q86UB9 458 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 SCML4Q8N228 414 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 RTL3Q8N8U3 475 aaKnown RBP12.63□□□□□ -0.39
RNF4-201ENST00000314289 SLAIN1Q8ND83 568 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 PPP1R14CQ8TAE6 165 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 PSMG2Q969U7 264 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 FSD1LQ9BXM9 530 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 FBXO44Q9H4M3 255 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 NT5MQ9NPB1 228 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 PHF24Q9UPV7 400 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 TLR6Q9Y2C9 796 aa12.63□□□□□ -0.39
RNF4-201ENST00000314289 TMEM189-UBE2V1I3L0A0 370 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 MTSS1O43312 755 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 ITM2AO43736 263 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 FKTNO75072 461 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 SMIM24O75264 130 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CAPN15O75808 1086 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 VAPBO95292 243 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 ALDH3A1P30838 453 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CRHR1P34998 444 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CCNFP41002 786 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CDK7P50613 346 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 ARFIP2P53365 341 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CCDC15Q0P6D6 951 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CBLBQ13191 982 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 BFSP2Q13515 415 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 MUM1Q2TAK8 710 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 FASTKD1Q53R41 847 aaKnown RBP12.62□□□□□ -0.39
RNF4-201ENST00000314289 SPANXN3Q5MJ09 141 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 TEDDM1Q5T9Z0 273 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 AP1ARQ63HQ0 302 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 ESRP1Q6NXG1 681 aaKnown RBP12.62□□□□□ -0.39
RNF4-201ENST00000314289 FBXL22Q6P050 247 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 ALYREFQ86V81 257 aaKnown RBP12.62□□□□□ -0.39
RNF4-201ENST00000314289 DENND6AQ8IWF6 608 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 SPATA6LQ8N4H0 392 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 RPRD1AQ96P16 312 aaPredicted RBP12.62□□□□□ -0.39
RNF4-201ENST00000314289 TRIM62Q9BVG3 475 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 RNF208Q9H0X6 261 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 GLOD4Q9HC38 313 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 SNX15Q9NRS6 342 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CPSF2Q9P2I0 782 aaKnown RBP12.62□□□□□ -0.39
RNF4-201ENST00000314289 ZFP69BQ9UJL9 534 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 A6NHS1 94 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 LIN7AO14910 233 aaPredicted RBP12.62□□□□□ -0.39
RNF4-201ENST00000314289 SYN3O14994 580 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 MATN3O15232 486 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 MAP3K13O43283 966 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CCNCP24863 283 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 GP5P40197 560 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 PTDSS1P48651 473 aaKnown RBP12.62□□□□□ -0.39
RNF4-201ENST00000314289 ZBTB16Q05516 673 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CDH17Q12864 832 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 ZNF460Q14592 562 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 CHSY1Q86X52 802 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 SEPT8Q92599 483 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 FUBP3Q96I24 572 aaKnown RBP eCLIP12.62□□□□□ -0.39
RNF4-201ENST00000314289 C8orf48Q96LL4 319 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 SH3GL3Q99963 347 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 TBL1YQ9BQ87 522 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 RAD54BQ9Y620 910 aa12.62□□□□□ -0.39
RNF4-201ENST00000314289 DLDP09622 509 aaKnown RBP12.61□□□□□ -0.39
RNF4-201ENST00000314289 ATF6P18850 670 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 OR1D2P34982 312 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 CCNG1P51959 295 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 COG7P83436 770 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 NAPEPLDQ6IQ20 393 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 ATG14Q6ZNE5 492 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 AGR3Q8TD06 166 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 SLC39A13Q96H72 371 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 VAT1Q99536 393 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 NAT9Q9BTE0 207 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 HIPK3Q9H422 1215 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.61□□□□□ -0.39
RNF4-201ENST00000314289 SLC39A10Q9ULF5 831 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 UNC80Q8N2C7 3258 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 PRRC2BQ5JSZ5 2229 aaKnown RBP12.61□□□□□ -0.39
RNF4-201ENST00000314289 MYO7AQ13402 2215 aa12.61□□□□□ -0.39
RNF4-201ENST00000314289 FGF10O15520 208 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms