RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 MEIS3P2A8K0S8 358 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ADCY6O43306 1168 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ENTPD5O75356 428 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SP100P23497 879 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 AGKQ53H12 422 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 LACTB2Q53H82 288 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PKN3Q6P5Z2 889 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SCLYQ96I15 445 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CLPBQ9H078 707 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 RIC8BQ9NVN3 520 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PLK2Q9NYY3 685 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.28□□□□□ -1.47e-6■□□□□ 9.9
PRKDC-201ENST00000314191 FBXW11Q9UKB1 542 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CRYBG1Q9Y4K1 1723 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CYLC2Q14093 348 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 LRRC8DQ7L1W4 858 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SETD3Q86TU7 594 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 TDRPQ86YL5 185 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 DNMT3LQ9UJW3 386 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 BTN3A1O00481 513 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ZNF865P0CJ78 1059 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PTPN3P26045 913 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 HOXA11P31270 313 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-201ENST00000314191 CYTH1Q15438 398 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SNX30Q5VWJ9 437 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 HDAC10Q969S8 669 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 FAR2Q96K12 515 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 DYRK4Q9NR20 520 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 SEPT3Q9UH03 358 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 GTF2IRD1Q9UHL9 959 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 PKD1L3Q7Z443 1732 aa6.28□□□□□ -1.4
PRKDC-201ENST00000314191 ATP6AP2A0A1C7CYW4 349 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 ATP6AP2O75787 350 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 FOXN2P32314 431 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 ABL2P42684 1182 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 TBCCQ15814 346 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 TMEM259Q4ZIN3 620 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 IRGQQ8WZA9 623 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 ZNF558Q96NG5 402 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 ACOX2Q99424 681 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 SLC24A3Q9HC58 644 aa6.27□□□□□ -1.4
PRKDC-201ENST00000314191 PROCP04070 461 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 ITGALP20701 1170 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 EEF1B2P24534 225 aaKnown RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 LIMK2P53671 638 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 KCNK10P57789 538 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 CLDN10P78369 228 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 IKBKEQ14164 716 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 MPP2Q14168 576 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 ESRP1Q6NXG1 681 aaKnown RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 PIGWQ7Z7B1 504 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 NAF1Q96HR8 494 aaKnown RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 SEMA4BQ9NPR2 832 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 WWOXQ9NZC7 414 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 CLUHO75153 1309 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 FKTNO75072 461 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 STAU1O95793 577 aaKnown RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 KCNE1P15382 129 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 USP4Q13107 963 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 UBAP2LQ14157 1087 aaKnown RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 INPP5DQ92835 1189 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 ZNF395Q9H8N7 513 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 H2AFYO75367 372 aaKnown RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 SELPP16109 830 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 PAX3P23760 479 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 CCND3P30281 292 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 VWA5B1Q5TIE3 1220 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 LRRC49Q8IUZ0 686 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 IGDCC3Q8IVU1 814 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 PCYOX1LQ8NBM8 494 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 TRIB2Q92519 343 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 EMID1Q96A84 441 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 PAAF1Q9BRP4 392 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 SLC39A8Q9C0K1 460 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 ADAM28Q9UKQ2 775 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 GUCA1CO95843 209 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 TPBGLP0DKB5 382 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 TCHHL1Q5QJ38 904 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 TMCO4Q5TGY1 634 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 CIR1Q86X95 450 aaPredicted RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 MFN1Q8IWA4 741 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 LRRC43Q8N309 656 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 FBXO39Q8N4B4 442 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 SNX31Q8N9S9 440 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 EME1Q96AY2 570 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 CCDC138Q96M89 665 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 SF3B1O75533 1304 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■■■ 63.9
PRKDC-201ENST00000314191 SLCO1B7G3V0H7 640 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 SOCS7O14512 581 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 AOC2O75106 756 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 GPR32O75388 356 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 TBX18O95935 607 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 RPL17P18621 184 aaKnown RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 NMBRP28336 390 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 CDK7P50613 346 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 TBL3Q12788 808 aaKnown RBP6.27□□□□□ -1.41
PRKDC-201ENST00000314191 ARHGAP15Q53QZ3 475 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 ANKS6Q68DC2 871 aa6.27□□□□□ -1.41
PRKDC-201ENST00000314191 SLC9A4Q6AI14 798 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms