RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 SLC8A2Q9UPR5 921 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 PCDHGA7Q9Y5G6 932 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 SQORQ9Y6N5 450 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 ANKRD31Q8N7Z5 1873 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 RNF103-CHMP3A0A140T963 221 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 HEATR9A2RTY3 570 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 MPOP05164 745 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 GRIA3P42263 894 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 CLCN3P51790 818 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 C21orf59P57076 290 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 RHDQ02161 417 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 BNIP3Q12983 259 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 DPYSL2Q16555 572 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 SPANXN3Q5MJ09 141 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 HMBOX1Q6NT76 420 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 CHST15Q7LFX5 561 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-202ENST00000310645 GPR180Q86V85 440 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 SLCO4A1Q96BD0 722 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 FAM149B1Q96BN6 582 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 CXorf21Q9HAI6 301 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 CNOT6Q9ULM6 557 aaKnown RBP14.9□□□□□ -0.02
COL6A2-202ENST00000310645 COQ6Q9Y2Z9 468 aa14.9□□□□□ -0.02
COL6A2-202ENST00000310645 PCNTO95613 3336 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 TMEM221A6NGB7 291 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 HMGCS2P54868 508 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 NAB1Q13506 487 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 TMEM132BQ14DG7 1078 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 MAP7D1Q3KQU3 841 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 FGD3Q5JSP0 725 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 KCNMB4Q86W47 210 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 CBR4Q8N4T8 237 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 LZTR1Q8N653 840 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 CANT1Q8WVQ1 401 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 COX4I2Q96KJ9 171 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 NAA50Q9GZZ1 169 aaKnown RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 TBCCD1Q9NVR7 557 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 TUBGCP4Q9UGJ1 667 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 A0A087WXM4 84 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 HCRTO43612 131 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 TADA2AO75478 443 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 PORP16435 677 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 CD247P20963 164 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 UBA1P22314 1058 aaKnown RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 ADORA2BP29275 332 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 HMOX2P30519 316 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 RELAQ04206 551 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 TARBP2Q15633 366 aaKnown RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 IER5Q5VY09 327 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 TMEM26Q6ZUK4 368 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 OFCC1Q8IZS5 231 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 FSTL5Q8N475 847 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 CNTD1Q8N815 330 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 DDHD1Q8NEL9 900 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 CPB2Q96IY4 423 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 EFHD1Q9BUP0 239 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 PRDM16Q9HAZ2 1276 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 CYP4F12Q9HCS2 524 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 NEMP2A6NFY4 417 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 GPC4O75487 556 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 RXRGP48443 463 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 NME5P56597 212 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 IGBP1P78318 339 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 PRKCQQ04759 706 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 TGFBIQ15582 683 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 NEDD8Q15843 81 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 SOWAHAQ2M3V2 549 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 LSMEM2Q8N112 164 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 CPSF7Q8N684 471 aaKnown RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 ZNF277Q9NRM2 450 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 XPR1Q9UBH6 696 aa14.89□□□□□ -0.03
COL6A2-202ENST00000310645 PPP1R1BQ9UD71 204 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 CNOT11Q9UKZ1 510 aaKnown RBP14.89□□□□□ -0.03
COL6A2-202ENST00000310645 RGPD3A6NKT7 1758 aaPredicted RBP14.88□□□□□ -0.03
COL6A2-202ENST00000310645 RGPD4Q7Z3J3 1758 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 CBFA2T3O75081 653 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 GABBR2O75899 941 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 ZBED5Q49AG3 693 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 ZYG11AQ6WRX3 759 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 RNF135Q8IUD6 432 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 SLC41A1Q8IVJ1 513 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 ADAM28Q9UKQ2 775 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 ANKRD12Q6UB98 2062 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 COL2A1P02458 1487 aaPredicted RBP14.88□□□□□ -0.03
COL6A2-202ENST00000310645 ACKR2O00590 384 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 DLX3O60479 287 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 DDHD2O94830 711 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 UGT1A1P22309 533 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 UGT1A4P22310 534 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 UGT1A3P35503 534 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 UGT1A5P35504 534 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 YAP1P46937 504 aaKnown RBP14.88□□□□□ -0.03
COL6A2-202ENST00000310645 PRPSAP1Q14558 356 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 PPP1R3AQ16821 1122 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 CLEC14AQ86T13 490 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 OR9I1Q8NGQ6 314 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 PBXIP1Q96AQ6 731 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 YIPF2Q9BWQ6 316 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 ACAD9Q9H845 621 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 POLR1BQ9H9Y6 1135 aa14.88□□□□□ -0.03
COL6A2-202ENST00000310645 VPS45Q9NRW7 570 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms