RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 USP33Q8TEY7 942 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 CNDP1Q96KN2 507 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 FZD8Q9H461 694 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 MTMR10Q9NXD2 777 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 ACOT9Q9Y305 439 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 SH3GLB1Q9Y371 365 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 M0QYT0 321 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 HCRTO43612 131 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 EGFRP00533 1210 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 GRIA3P42263 894 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 NDST2P52849 883 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 NME5P56597 212 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 DPYSQ14117 519 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 PITRM1Q5JRX3 1037 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 ZYG11AQ6WRX3 759 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 CNTD1Q8N815 330 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 FNDC8Q8TC99 324 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 RNF11Q9Y3C5 154 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 GRID2O43424 1007 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 SRP72O76094 671 aaKnown RBP11.31□□□□□ -0.6
PTPN7-201ENST00000309017 VTNP04004 478 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 ICAM3P32942 547 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 PLK1P53350 603 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 STX1BP61266 288 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 KIF19Q2TAC6 998 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 GRAMD4Q6IC98 578 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 DUS1LQ6P1R4 473 aaKnown RBP11.31□□□□□ -0.6
PTPN7-201ENST00000309017 CROCCP3Q8IVE0 287 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 FSTL5Q8N475 847 aaPredicted RBP11.31□□□□□ -0.6
PTPN7-201ENST00000309017 DNERQ8NFT8 737 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 ASB9Q96DX5 294 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 SLC29A1Q99808 456 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 EIF2B3Q9NR50 452 aaKnown RBP11.31□□□□□ -0.6
PTPN7-201ENST00000309017 CHST12Q9NRB3 414 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 NCKIPSDQ9NZQ3 722 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 CROCCQ5TZA2 2017 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 LY75O60449 1722 aa11.31□□□□□ -0.6
PTPN7-201ENST00000309017 MRASO14807 208 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 UBDO15205 165 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 TADA2AO75478 443 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 EEF1B2P24534 225 aaKnown RBP11.3□□□□□ -0.6
PTPN7-201ENST00000309017 PSMD7P51665 324 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SLC5A3P53794 718 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 MBTD1Q05BQ5 628 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SFSWAPQ12872 951 aaKnown RBP11.3□□□□□ -0.6
PTPN7-201ENST00000309017 KDELC2Q7Z4H8 507 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 TMEM110Q86TL2 294 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 TMEM102Q8N9M5 508 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-201ENST00000309017 ELMO2Q96JJ3 720 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 OSBPL6Q9BZF3 934 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 PTPRHQ9HD43 1115 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 A0A087WXM4 84 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 PSMD12O00232 456 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-201ENST00000309017 ZNF26P17031 533 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-201ENST00000309017 PTPRAP18433 802 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 PTPN9P43378 593 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SLC12A1Q13621 1099 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 BORAQ6PGQ7 559 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 ANKRD23Q86SG2 305 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 DHFR2Q86XF0 187 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 CHERPQ8IWX8 916 aaKnown RBP11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SNX25Q9H3E2 840 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 DPEP3Q9H4B8 488 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SQORQ9Y6N5 450 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 FAM149AA5PLN7 773 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 H3BNH8 94 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 IQCF3P0C7M6 154 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 PROZP22891 400 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 TPI1P60174 286 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 EN1Q05925 392 aaPredicted RBP11.3□□□□□ -0.6
PTPN7-201ENST00000309017 CTBP1Q13363 440 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SEPT6Q14141 434 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SLC35F5Q8WV83 523 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SLC39A3Q9BRY0 314 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 POMKQ9H5K3 350 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 LRRC4Q9HBW1 653 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 SPAG4Q9NPE6 437 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 EBF1Q9UH73 591 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 PADI4Q9UM07 663 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 ZNF510Q9Y2H8 683 aa11.3□□□□□ -0.6
PTPN7-201ENST00000309017 IGKV6D-21A0A0A0MT36 114 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ATP6AP2A0A1C7CYW4 349 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 TCAF2A6NFQ2 919 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 NEMP2A6NFY4 417 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ATP6AP2O75787 350 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 STMN1P16949 149 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 NMBRP28336 390 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 SLC7A2P52569 658 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 INCA1Q0VD86 236 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 BST2Q10589 180 aaKnown RBP11.29□□□□□ -0.6
PTPN7-201ENST00000309017 ATP1A4Q13733 1029 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 TBCELQ5QJ74 424 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 GPR107Q5VW38 600 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 IFNEQ86WN2 208 aa11.29□□□□□ -0.6
PTPN7-201ENST00000309017 TICAM1Q8IUC6 712 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms