RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ZBTB24O43167 697 aaPredicted RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 ADAM23O75077 832 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 TMCC1O94876 653 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 JCHAINP01591 159 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 APODP05090 189 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 POLR2EP19388 210 aaKnown RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 DRD1P21728 446 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 IVDP26440 423 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 IL12RB1P42701 662 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 ATP5OP48047 213 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 MRPS25P82663 173 aaKnown RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 SLC20A2Q08357 652 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 GAS6Q14393 721 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 ZNF234Q14588 700 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 LBRQ14739 615 aaKnown RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 EIF4HQ15056 248 aaKnown RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 TEX44Q53QW1 395 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 ALG1LQ6GMV1 187 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 DARS2Q6PI48 645 aaKnown RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 CCDC137Q6PK04 289 aaKnown RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 SUGP1Q8IWZ8 645 aaKnown RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 KLHDC8BQ8IXV7 354 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 ZNF567Q8N184 647 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 SIX5Q8N196 739 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 FAM71DQ8N9W8 422 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 IL17RCQ8NAC3 791 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 ATL2Q8NHH9 583 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 ARRDC2Q8TBH0 407 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 PTPRN2Q92932 1015 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 TADA1Q96BN2 335 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 TEKT5Q96M29 485 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 PSKH2Q96QS6 385 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 UHRF1Q96T88 793 aaPredicted RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 CARD6Q9BX69 1037 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 CIPCQ9C0C6 399 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 HOMER3Q9NSC5 361 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 AMACRQ9UHK6 382 aa9.66□□□□□ -0.86
RFX3-201ENST00000302303 FCF1Q9Y324 198 aaKnown RBP9.66□□□□□ -0.86
RFX3-201ENST00000302303 TTC24A2A3L6 582 aaPredicted RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 ZSCAN5CA6NGD5 496 aaPredicted RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 CCDC188H7C350 402 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 KCNN4O15554 427 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 GCATO75600 419 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 METTL18O95568 372 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 PDGFBP01127 241 aaPredicted RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 ASLP04424 464 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 HLA-DQB2P05538 268 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 SRPRAP08240 638 aaKnown RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 MMP2P08253 660 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 C7P10643 843 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 PRKCHP24723 683 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 STIP1P31948 543 aaKnown RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 CHRNA3P32297 505 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 RPL22P35268 128 aaKnown RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 FNTAP49354 379 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 SULT2A1Q06520 285 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 NIPAL4Q0D2K0 466 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 DLG2Q15700 870 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 C2orf27AQ580R0 203 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 TMCO4Q5TGY1 634 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 TIGD7Q6NT04 549 aaPredicted RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 RETSATQ6NUM9 610 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 CCDC117Q8IWD4 279 aaPredicted RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 KLHL7Q8IXQ5 586 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 MMGT1Q8N4V1 131 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 ZNF366Q8N895 744 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 KDM1BQ8NB78 822 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 CCDC110Q8TBZ0 833 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 USP33Q8TEY7 942 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 EDAQ92838 391 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 ISG20Q96AZ6 181 aaKnown RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 KRT12Q99456 494 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 MGME1Q9BQP7 344 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 FOXQ1Q9C009 403 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 SP110Q9HB58 689 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 LTB4R2Q9NPC1 389 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 POLR3BQ9NW08 1133 aaPredicted RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 RBM22Q9NW64 420 aaKnown RBP eCLIP9.65□□□□□ -0.86
RFX3-201ENST00000302303 C2orf42Q9NWW7 574 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 UBA2Q9UBT2 640 aaPredicted RBP9.65□□□□□ -0.86
RFX3-201ENST00000302303 ZNF148Q9UQR1 794 aa9.65□□□□□ -0.86
RFX3-201ENST00000302303 SHROOM3Q8TF72 1996 aa9.65□□□□□ -0.87
RFX3-201ENST00000302303 BDP1A6H8Y1 2624 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 KANSL1LA0AUZ9 987 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 MAN2B1O00754 1011 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 INSIG1O15503 277 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 ATP5BP06576 529 aaKnown RBP9.64□□□□□ -0.87
RFX3-201ENST00000302303 HLA-EP13747 358 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 MAXP61244 160 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 NSUN2Q08J23 767 aaKnown RBP eCLIP9.64□□□□□ -0.87
RFX3-201ENST00000302303 GRSF1Q12849 480 aaKnown RBP eCLIP9.64□□□□□ -0.87
RFX3-201ENST00000302303 RFTN1Q14699 578 aaPredicted RBP9.64□□□□□ -0.87
RFX3-201ENST00000302303 ANKRD20A2Q5SQ80 823 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 C9orf64Q5T6V5 341 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 ANKRD20A1Q5TYW2 823 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 MARC1Q5VT66 337 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 ANKRD20A3Q5VUR7 823 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 HEATR6Q6AI08 1181 aaKnown RBP9.64□□□□□ -0.87
RFX3-201ENST00000302303 ZNF852Q6ZMS4 543 aa9.64□□□□□ -0.87
RFX3-201ENST00000302303 Q6ZS52 159 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms