RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CNTFP26441 200 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 PPM1AP35813 382 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 C21orf59P57076 290 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 NUP107P57740 925 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 UBE3AQ05086 875 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 PRKAA1Q13131 559 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 PLCL1Q15111 1095 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 SDHAF4Q5VUM1 108 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 ADGRD1Q6QNK2 874 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 KCNMB4Q86W47 210 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 LGI2Q8N0V4 545 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 RSPH1Q8WYR4 309 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 GPAMQ9HCL2 828 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 MARCH2Q9P0N8 246 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 C16orf96A6NNT2 1141 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 RTN3O95197 1032 aaPredicted RBP13.62□□□□□ -0.23
HPS3-201ENST00000296051 CDKN2BP42772 138 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 PSEN1P49768 467 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 CDK7P50613 346 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 CRYBB1P53674 252 aaPredicted RBP13.62□□□□□ -0.23
HPS3-201ENST00000296051 ADRM1Q16186 407 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 DHFR2Q86XF0 187 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 PARP8Q8N3A8 854 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 C12orf50Q8NA57 414 aaPredicted RBP13.62□□□□□ -0.23
HPS3-201ENST00000296051 NPAS2Q99743 824 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 DGCR6LQ9BY27 220 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 FAM105AQ9NUU6 356 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 RBM22Q9NW64 420 aaKnown RBP eCLIP13.62□□□□□ -0.23
HPS3-201ENST00000296051 TRDMT1O14717 391 aaKnown RBP13.62□□□□□ -0.23
HPS3-201ENST00000296051 TBC1D4O60343 1298 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 ZNF189O75820 626 aaPredicted RBP13.62□□□□□ -0.23
HPS3-201ENST00000296051 HNRNPLP14866 589 aaKnown RBP eCLIP13.62□□□□□ -0.236e-20■■■■■ 34.7
HPS3-201ENST00000296051 NFYCQ13952 458 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 PERM1Q5SV97 790 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 LRRC38Q5VT99 294 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 ANKS3Q6ZW76 656 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 SNX31Q8N9S9 440 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 CPXM1Q96SM3 734 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 EBNA1BP2Q99848 306 aaKnown RBP13.62□□□□□ -0.23
HPS3-201ENST00000296051 ULBP1Q9BZM6 244 aa13.62□□□□□ -0.23
HPS3-201ENST00000296051 MZF1P28698 734 aaPredicted RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 SERPINB1P30740 379 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 BRCC3P46736 316 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 TUBP50607 506 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 NEK2P51955 445 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 CAPSQ13938 189 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 PSMD5Q16401 504 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 FNDC3BQ53EP0 1204 aaKnown RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 EEF1DP3Q658K8 133 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 ILDR2Q71H61 639 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 MON1BQ7L1V2 547 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 PLPPR4Q7Z2D5 763 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 CALML6Q8TD86 181 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 MAML3Q96JK9 1138 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 BRD8Q9H0E9 1235 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 EXOSC4Q9NPD3 245 aaKnown RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 CROTQ9UKG9 612 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 A8MX80 341 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 SIN3BO75182 1162 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 TOP3BO95985 862 aaKnown RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 ITGA2BP08514 1039 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 SELPP16109 830 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 ATP5C1P36542 298 aaKnown RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 SAPCD2Q86UD0 394 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 NAT14Q8WUY8 206 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 GLMNQ92990 594 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 CIB1Q99828 191 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 MIR1-1HGQ9H1L0 117 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 CDT1Q9H211 546 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 SLC17A6Q9P2U8 582 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 RAB23Q9ULC3 237 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 GNEQ9Y223 722 aaKnown RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 IGLV3-22A0A075B6J6 115 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 ABLIM1O14639 778 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 BCL10O95999 233 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 FGFR1P11362 822 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 ADSSP30520 456 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 WASHC5Q12768 1159 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 KIAA1324Q6UXG2 1013 aaKnown RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 C4orf22Q6V702 233 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 IFNL1Q8IU54 200 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 DEFB106AQ8N104 65 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 EGFL7Q9UHF1 273 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 DAPK2Q9UIK4 370 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 CHADO15335 359 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 FKBP9O95302 570 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 TRUB2O95900 331 aaKnown RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 CCNB1P14635 433 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 GSSP48637 474 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 CYP51A1Q16850 503 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 GPR107Q5VW38 600 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 DNAJC14Q6Y2X3 702 aaPredicted RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 FKBP9P1Q75LS8 142 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 GIPC3Q8TF64 312 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 LENG8Q96PV6 779 aaPredicted RBP13.61□□□□□ -0.23
HPS3-201ENST00000296051 CDH22Q9UJ99 828 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 PADI3Q9ULW8 664 aa13.61□□□□□ -0.23
HPS3-201ENST00000296051 TDRKHQ9Y2W6 561 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms