RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 PPM1HQ9ULR3 514 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 CTNND2Q9UQB3 1225 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 ATP6V1DQ9Y5K8 247 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 OR51B4Q9Y5P0 310 aa9.54□□□□□ -0.88
CNOT9-202ENST00000295701 A0A1B0GVM2 712 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 TCAF2A6NFQ2 919 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 BECN2A8MW95 431 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 K7ERQ8 282 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 P4HA2O15460 535 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 YKT6O15498 198 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SART1O43290 800 aaKnown RBP9.53□□□□□ -0.88
CNOT9-202ENST00000295701 ATP9BO43861 1147 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SNAP91O60641 907 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 RNGTTO60942 597 aaKnown RBP9.53□□□□□ -0.88
CNOT9-202ENST00000295701 CNTN5O94779 1100 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 GIMD1P0DJR0 217 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 ZNF18P17022 549 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SLC9A1P19634 815 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 GLDCP23378 1020 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 GNA15P30679 374 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 PTGIRP43119 386 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 PDCLQ13371 301 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SLC12A1Q13621 1099 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 AUHQ13825 339 aaKnown RBP9.53□□□□□ -0.88
CNOT9-202ENST00000295701 STAT4Q14765 748 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 ARHGAP44Q17R89 818 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SLC45A4Q5BKX6 768 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 ZNF542PQ5EBM4 170 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 LRRC69Q6ZNQ3 347 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 TMC6Q7Z403 805 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 PASD1Q8IV76 773 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 CHST14Q8NCH0 376 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 RNF217Q8TC41 542 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 STK32AQ8WU08 396 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 RNF34Q969K3 372 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 ARRDC3Q96B67 414 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 KLHDC7BQ96G42 594 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 NAF1Q96HR8 494 aaKnown RBP9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SLC2A13Q96QE2 648 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 UBL7Q96S82 380 aaPredicted RBP9.53□□□□□ -0.88
CNOT9-202ENST00000295701 CPXM1Q96SM3 734 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 PSMB7Q99436 277 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SRRTQ9BXP5 876 aaKnown RBP9.53□□□□□ -0.88
CNOT9-202ENST00000295701 NRSN2Q9GZP1 204 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SIK2Q9H0K1 926 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 FAM204AQ9H8W3 233 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 ANLNQ9NQW6 1124 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.53□□□□□ -0.88
CNOT9-202ENST00000295701 DDIT4Q9NX09 232 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 SLC12A6Q9UHW9 1150 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 ZFR2Q9UPR6 939 aaKnown RBP9.53□□□□□ -0.88
CNOT9-202ENST00000295701 PCDHB1Q9Y5F3 818 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 HS3ST4Q9Y661 456 aa9.53□□□□□ -0.88
CNOT9-202ENST00000295701 A0A1W2PQU0 124 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 SLC35F4A4IF30 521 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 GOLGA6L4A6NEF3 574 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 PRAMEF26H0Y7S4 382 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 I6L893 689 aaPredicted RBP9.52□□□□□ -0.89
CNOT9-202ENST00000295701 MCF2LO15068 1137 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 FFAR2O15552 330 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 SMAD6O43541 496 aaKnown RBP9.52□□□□□ -0.89
CNOT9-202ENST00000295701 MT-CO3P00414 261 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 AFPP02771 609 aaKnown RBP9.52□□□□□ -0.89
CNOT9-202ENST00000295701 SRCP12931 536 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 TFE3P19532 575 aaPredicted RBP9.52□□□□□ -0.89
CNOT9-202ENST00000295701 DGKAP23743 735 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 RRM1P23921 792 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 ACP1P24666 158 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 USP8P40818 1118 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 CLDN2P57739 230 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 CDK17Q00537 523 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 SULT2A1Q06520 285 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 C19orf57Q0VDD7 668 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 CETN1Q12798 172 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 NME3Q13232 169 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 STIM1Q13586 685 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 ALFQ53S48 1182 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 RABGAP1LQ5R372 815 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 PIP5KL1Q5T9C9 394 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 OTUD1Q5VV17 481 aaPredicted RBP9.52□□□□□ -0.89
CNOT9-202ENST00000295701 FAM46CQ5VWP2 391 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 OR6B2Q6IFH4 312 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 PCSK4Q6UW60 755 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 FAM183BPQ6ZVS7 135 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 IQCHQ86VS3 1027 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 TRIM69Q86WT6 500 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 OXR1Q8N573 874 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 SH2D3CQ8N5H7 860 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 OR13H1Q8NG92 308 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 RFFLQ8WZ73 363 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 FGF11Q92914 225 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 RPRD1AQ96P16 312 aaPredicted RBP9.52□□□□□ -0.89
CNOT9-202ENST00000295701 FCRL3Q96P31 734 aaPredicted RBP9.52□□□□□ -0.89
CNOT9-202ENST00000295701 MED15Q96RN5 788 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 OSBPL2Q9H1P3 480 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 SLC25A13Q9UJS0 675 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 VPS28Q9UK41 221 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 AJAP1Q9UKB5 411 aaPredicted RBP9.52□□□□□ -0.89
CNOT9-202ENST00000295701 CLCA2Q9UQC9 943 aa9.52□□□□□ -0.89
CNOT9-202ENST00000295701 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms