RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 GAS8O95995 478 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 IVLP07476 585 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 ZSCAN5DPP0CG00 497 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 MYBL2P10244 700 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 CCNB1P14635 433 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 LMAN1P49257 510 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 GYS2P54840 703 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 ZXDAP98168 799 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 KDSRQ06136 332 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 ZBTB17Q13105 803 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 DMC1Q14565 340 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 TRIP13Q15645 432 aaPredicted RBP18.12■□□□□ 0.49
CCDC78-201ENST00000293889 IER5LQ5T953 404 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 TMEM215Q68D42 235 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 LINGO4Q6UY18 593 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 JAMLQ86YT9 394 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 AHI1Q8N157 1196 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 PHTF2Q8N3S3 785 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 ZNF419Q96HQ0 510 aaPredicted RBP18.12■□□□□ 0.49
CCDC78-201ENST00000293889 FERMT1Q9BQL6 677 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 CEP41Q9BYV8 373 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 SLC2A4RGQ9NR83 387 aa18.12■□□□□ 0.49
CCDC78-201ENST00000293889 C5orf60A6NFR6 353 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 AGPSO00116 658 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 TNFRSF10AO00220 468 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 DCXO43602 365 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 ZNF189O75820 626 aaPredicted RBP18.11■□□□□ 0.49
CCDC78-201ENST00000293889 JCHAINP01591 159 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 KRT14P02533 472 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 PTPN3P26045 913 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 CTSOP43234 321 aaPredicted RBP18.11■□□□□ 0.49
CCDC78-201ENST00000293889 IFI35P80217 286 aaPredicted RBP18.11■□□□□ 0.49
CCDC78-201ENST00000293889 SLC10A7Q0GE19 358 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 PPP1R7Q15435 360 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 UBALD2Q8IYN6 164 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 CCDC89Q8N998 374 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 USP33Q8TEY7 942 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 DNASE1L2Q92874 299 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 ACDQ96AP0 544 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 ZNF599Q96NL3 588 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 SH3GL2Q99962 352 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 TRIM51Q9BSJ1 452 aa18.11■□□□□ 0.49
CCDC78-201ENST00000293889 TECTAO75443 2155 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 FAM187AA6NFU0 413 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 ZSCAN5CA6NGD5 496 aaPredicted RBP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 RNF40O75150 1001 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 STK10O94804 968 aaKnown RBP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 CD160O95971 181 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 EIF2DP41214 584 aaKnown RBP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 SLC7A5Q01650 507 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 HNRNPDQ14103 355 aaKnown RBP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 TEX44Q53QW1 395 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 ALS2CLQ60I27 953 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 MBLAC2Q68D91 279 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 ZNF567Q8N184 647 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 EIF1ADQ8N9N8 165 aaKnown RBP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 CCDC110Q8TBZ0 833 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 WFIKKN2Q8TEU8 576 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 NSMCE1Q8WV22 266 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 TTC17Q96AE7 1141 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 IL12RB2Q99665 862 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 GDF3Q9NR23 364 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 HEBP1Q9NRV9 189 aa18.1■□□□□ 0.49
CCDC78-201ENST00000293889 RBM22Q9NW64 420 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 UBA2Q9UBT2 640 aaPredicted RBP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 DMGDHQ9UI17 866 aaKnown RBP18.1■□□□□ 0.49
CCDC78-201ENST00000293889 A0A0A0MRY4 1105 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 PRRT4C9JH25 899 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 SPECC1L-ADORA2AF8WAN1 911 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 GCATO75600 419 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 MT-CO1P00395 513 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 RPL22P35268 128 aaKnown RBP18.09■□□□□ 0.49
CCDC78-201ENST00000293889 TNNT3P45378 269 aaPredicted RBP18.09■□□□□ 0.49
CCDC78-201ENST00000293889 RENBPP51606 427 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 PTK6Q13882 451 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 LBRQ14739 615 aaKnown RBP18.09■□□□□ 0.49
CCDC78-201ENST00000293889 P3H1Q32P28 736 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 ANKRD20A2Q5SQ80 823 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 TMCO4Q5TGY1 634 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 ANKRD20A1Q5TYW2 823 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 MARC1Q5VT66 337 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 ANKRD20A3Q5VUR7 823 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 RETSATQ6NUM9 610 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 SYDE1Q6ZW31 735 aaPredicted RBP18.09■□□□□ 0.49
CCDC78-201ENST00000293889 SFTPA1Q8IWL2 248 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 TEX26Q8N6G2 289 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 CNTD1Q8N815 330 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 EDAQ92838 391 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 SPATA13Q96N96 652 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 PCDH9Q9HC56 1237 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 FBRSL1Q9HCM7 1045 aaKnown RBP18.09■□□□□ 0.49
CCDC78-201ENST00000293889 CUL9Q8IWT3 2517 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 KIAA1549LQ6ZVL6 1849 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 POLR2EP19388 210 aaKnown RBP18.09■□□□□ 0.49
CCDC78-201ENST00000293889 CTHP32929 405 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 MMP13P45452 471 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 VPS41P49754 854 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 GALK1P51570 392 aa18.09■□□□□ 0.49
CCDC78-201ENST00000293889 ECT2LQ008S8 904 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms