RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 TREML1Q86YW5 311 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 ZNF567Q8N184 647 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 SPATA22Q8NHS9 363 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 PPP1R14CQ8TAE6 165 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 SPECC1L-ADORA2AF8WAN1 911 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 ZBTB24O43167 697 aaPredicted RBP13.1□□□□□ -0.31
ZIC3-201ENST00000287538 ZNF623O75123 536 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 DLDP09622 509 aaKnown RBP13.1□□□□□ -0.31
ZIC3-201ENST00000287538 VCLP18206 1134 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 BGNP21810 368 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 HOXC8P31273 242 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 MPP3Q13368 585 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 CYLC2Q14093 348 aaPredicted RBP13.1□□□□□ -0.31
ZIC3-201ENST00000287538 SEPT6Q14141 434 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 PDK3Q15120 406 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 PDZD4Q76G19 769 aaPredicted RBP13.1□□□□□ -0.31
ZIC3-201ENST00000287538 CAND1Q86VP6 1230 aaKnown RBP13.1□□□□□ -0.31
ZIC3-201ENST00000287538 TMEM173Q86WV6 379 aaPredicted RBP13.1□□□□□ -0.31
ZIC3-201ENST00000287538 ZNF276Q8N554 614 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 PNPLA1Q8N8W4 532 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 LINC01599Q8WXQ3 324 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 FBXO32Q969P5 355 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 FCRL2Q96LA5 508 aaPredicted RBP13.1□□□□□ -0.31
ZIC3-201ENST00000287538 GMIPQ9P107 970 aa13.1□□□□□ -0.31
ZIC3-201ENST00000287538 ARHGAP42A6NI28 874 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 PAGE1O75459 146 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 IRF1P10914 325 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 KLHL38Q2WGJ6 581 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 CCSAPQ6IQ19 270 aaPredicted RBP13.09□□□□□ -0.31
ZIC3-201ENST00000287538 DHDDSQ86SQ9 333 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.09□□□□□ -0.31
ZIC3-201ENST00000287538 NDUFA13Q9P0J0 144 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 MARCOQ9UEW3 520 aaPredicted RBP13.09□□□□□ -0.31
ZIC3-201ENST00000287538 RANBP2P49792 3224 aaKnown RBP13.09□□□□□ -0.31
ZIC3-201ENST00000287538 ARVCFO00192 962 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 NBNO60934 754 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 MAXP61244 160 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 HNRNPDQ14103 355 aaKnown RBP13.09□□□□□ -0.31
ZIC3-201ENST00000287538 KCNJ11Q14654 390 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 PSMD5Q16401 504 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 UNC5AQ6ZN44 842 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 ZNF554Q86TJ5 538 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 SPNS2Q8IVW8 549 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 SHKBP1Q8TBC3 707 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 ZNF669Q96BR6 464 aaPredicted RBP13.09□□□□□ -0.31
ZIC3-201ENST00000287538 VPS11Q9H270 941 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 ACSS2Q9NR19 701 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 FBXW11Q9UKB1 542 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 A0A0A0MRY4 1105 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 VILLO15195 856 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 MT-CYBP00156 380 aaPredicted RBP13.09□□□□□ -0.31
ZIC3-201ENST00000287538 SELPP16109 830 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 NFKB1P19838 968 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 CHN2P52757 468 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 ITGA9Q13797 1035 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 TAZQ16635 292 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 TAS1R1Q7RTX1 841 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 HIPK4Q8NE63 616 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 SLC26A7Q8TE54 656 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 SPATA13Q96N96 652 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 YIPF2Q9BWQ6 316 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 FOXP3Q9BZS1 431 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.09□□□□□ -0.31
ZIC3-201ENST00000287538 NDFIP2Q9NV92 336 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 SLC24A2Q9UI40 661 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 ZNF711Q9Y462 761 aa13.09□□□□□ -0.31
ZIC3-201ENST00000287538 MEI4A8MW99 385 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 MSLNQ13421 630 aaPredicted RBP13.08□□□□□ -0.31
ZIC3-201ENST00000287538 CERCAMQ5T4B2 595 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 LHX8Q68G74 356 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 C16orf46Q6P387 395 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 KLHDC10Q6PID8 442 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.31
ZIC3-201ENST00000287538 CFAP52Q8N1V2 620 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 AUTS2Q8WXX7 1259 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 CENPIQ92674 756 aaPredicted RBP13.08□□□□□ -0.31
ZIC3-201ENST00000287538 MECRQ9BV79 373 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 KLHL4Q9C0H6 718 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 WDR6Q9NNW5 1121 aaKnown RBP13.08□□□□□ -0.31
ZIC3-201ENST00000287538 CDY1Q9Y6F8 540 aa13.08□□□□□ -0.31
ZIC3-201ENST00000287538 SLC12A8A0AV02 714 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 BCLAF3A2AJT9 711 aaKnown RBP13.08□□□□□ -0.32
ZIC3-201ENST00000287538 COPEO14579 308 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 ENPP3O14638 875 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 FKBP6O75344 327 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 CABYRO75952 493 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 PEX2P28328 305 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 DSC3Q14574 896 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 TMCO4Q5TGY1 634 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 SERAC1Q96JX3 654 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 ZNF512Q96ME7 567 aaPredicted RBP13.08□□□□□ -0.32
ZIC3-201ENST00000287538 KLHL5Q96PQ7 755 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 SPON2Q9BUD6 331 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 FRMD8P1Q9BZ68 369 aaPredicted RBP13.08□□□□□ -0.32
ZIC3-201ENST00000287538 ACSS3Q9H6R3 686 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 S100A14Q9HCY8 104 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 SYBUQ9NX95 663 aa13.08□□□□□ -0.32
ZIC3-201ENST00000287538 SMPD4Q9NXE4 827 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms