RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 H0Y626 953 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 CPP00450 1065 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 CEBPBP17676 345 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 SPARCL1Q14515 664 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 ZNF77Q15935 545 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 RNF219Q5W0B1 726 aaPredicted RBP14.35□□□□□ -0.11
SS18-201ENST00000269137 TMC5Q6UXY8 1006 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 TMEM184AQ6ZMB5 413 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 CCNJLQ8IV13 435 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 CARNMT1Q8N4J0 409 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 KIAA1958Q8N8K9 716 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 SPATA22Q8NHS9 363 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 EPS8L3Q8TE67 593 aaKnown RBP14.35□□□□□ -0.11
SS18-201ENST00000269137 ZSWIM3Q96MP5 696 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 SPON2Q9BUD6 331 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 ACSS3Q9H6R3 686 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 NT5MQ9NPB1 228 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 VPS45Q9NRW7 570 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 HAUS2Q9NVX0 235 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 RABGEF1Q9UJ41 708 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 TTLL3Q9Y4R7 772 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 OR51B4Q9Y5P0 310 aa14.35□□□□□ -0.11
SS18-201ENST00000269137 PRAMEF12O95522 483 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 ADRA1AP35348 466 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 NPY2RP49146 381 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 USP4Q13107 963 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 MPP3Q13368 585 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 RASA2Q15283 850 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 LONRF1Q17RB8 773 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 TNFAIP8L3Q5GJ75 292 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 ALG1LQ6GMV1 187 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 POTEHQ6S545 545 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 TDRPQ86YL5 185 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 ARID3BQ8IVW6 561 aaPredicted RBP14.34□□□□□ -0.11
SS18-201ENST00000269137 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 BBS5Q8N3I7 341 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 MPP5Q8N3R9 675 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 TTC16Q8NEE8 873 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 OR52K1Q8NGK4 314 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 RIN3Q8TB24 985 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 ITFG1Q8TB96 612 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 DDI1Q8WTU0 396 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 TADA1Q96BN2 335 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 FEM1AQ9BSK4 669 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 MUC3BQ9H195 1237 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 CENPHQ9H3R5 247 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 TBC1D14Q9P2M4 693 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 EXOC1LA0A1B0GW35 172 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 TLDC2A0PJX2 215 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 RGS16O15492 202 aaPredicted RBP14.34□□□□□ -0.11
SS18-201ENST00000269137 CDH16O75309 829 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 ZMPSTE24O75844 475 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 MT-CYBP00156 380 aaPredicted RBP14.34□□□□□ -0.11
SS18-201ENST00000269137 CYBBP04839 570 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 SESN2P58004 480 aaPredicted RBP14.34□□□□□ -0.11
SS18-201ENST00000269137 CDH18Q13634 790 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 FSCBQ5H9T9 825 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 STEAP4Q687X5 459 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 KDELC1Q6UW63 502 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 CYS1Q717R9 158 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 PRPF39Q86UA1 669 aaKnown RBP14.34□□□□□ -0.11
SS18-201ENST00000269137 PGBD5Q8N414 524 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 RIBC1Q8N443 379 aaPredicted RBP14.34□□□□□ -0.11
SS18-201ENST00000269137 FIBINQ8TAL6 211 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 ARRDC2Q8TBH0 407 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 TLCD1Q96CP7 247 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 OTUB2Q96DC9 234 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 ALG14Q96F25 216 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 STAMBPL1Q96FJ0 436 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 PSKH2Q96QS6 385 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 STMN4Q9H169 189 aaPredicted RBP14.34□□□□□ -0.11
SS18-201ENST00000269137 KIF9Q9HAQ2 790 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 PLAC1Q9HBJ0 212 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 UBP1Q9NZI7 540 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 BFARQ9NZS9 450 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 UBA2Q9UBT2 640 aaPredicted RBP14.34□□□□□ -0.11
SS18-201ENST00000269137 SEPT3Q9UH03 358 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 LGALS13Q9UHV8 139 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 SLC24A2Q9UI40 661 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 MAD1L1Q9Y6D9 718 aa14.34□□□□□ -0.11
SS18-201ENST00000269137 TCRBV9S1A1TA0A576 114 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 RFXAPO00287 272 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 POLR3GO15318 223 aaPredicted RBP14.33□□□□□ -0.12
SS18-201ENST00000269137 USP12O75317 370 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 AGTP01019 485 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 MGAT1P26572 445 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 STX2P32856 288 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 SLCO1A2P46721 670 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 CDH17Q12864 832 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 OLIG2Q13516 323 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 ZNF235Q14590 738 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 KLHL38Q2WGJ6 581 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 FYB2Q5VWT5 728 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 KCTD16Q68DU8 428 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 UNC5AQ6ZN44 842 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 CAPN12Q6ZSI9 719 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 MFN1Q8IWA4 741 aa14.33□□□□□ -0.12
SS18-201ENST00000269137 CCDC117Q8IWD4 279 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms