RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 RBM44Q6ZP01 1051 aaKnown RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 C3orf62Q6ZUJ4 267 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 PRPF39Q86UA1 669 aaKnown RBP12.88□□□□□ -0.35
PRPF6-201ENST00000266079 PYDC1Q8WXC3 89 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 GDF15Q99988 308 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 CSNK1G1Q9HCP0 422 aa12.88□□□□□ -0.35
PRPF6-201ENST00000266079 A0A088AWK7 358 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 SMIM18P0DKX4 95 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 KRT10P13645 584 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 ATF6P18850 670 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 ACADSBP45954 432 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 RPL5P46777 297 aaKnown RBP12.87□□□□□ -0.35
PRPF6-201ENST00000266079 TBCCQ15814 346 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 KAZNQ674X7 775 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 SPATA18Q8TC71 538 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 SPPL3Q8TCT6 385 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 SP7Q8TDD2 431 aaPredicted RBP12.87□□□□□ -0.35
PRPF6-201ENST00000266079 GDPD5Q8WTR4 605 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 HERC2P3Q9BVR0 1158 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 CCDC106Q9BWC9 280 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 ZBP1Q9H171 429 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 USP29Q9HBJ7 922 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 ADAMTS6Q9UKP5 1117 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 SSX2IPQ9Y2D8 614 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 BRWD1Q9NSI6 2320 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 GPD1P21695 349 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 SDC4P31431 198 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 DAOAP59103 153 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 YWHAZP63104 245 aaKnown RBP12.87□□□□□ -0.35
PRPF6-201ENST00000266079 TAP1Q03518 808 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 SLC18A2Q05940 514 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 PPP2R2DQ66LE6 453 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 TRIM42Q8IWZ5 723 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 ARFGAP1Q8N6T3 406 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 WWP1Q9H0M0 922 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 TMEM165Q9HC07 324 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 TMPRSS4Q9NRS4 437 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 GPATCH2LQ9NWQ4 482 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
PRPF6-201ENST00000266079 C2CD4BA6NLJ0 364 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 CTSAP10619 480 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 PDE1BQ01064 536 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TBL3Q12788 808 aaKnown RBP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 CYLC2Q14093 348 aaPredicted RBP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 CCDC14Q49A88 953 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 ZNF697Q5TEC3 545 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 PPP1R2P3Q6NXS1 205 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SERAC1Q96JX3 654 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 C7orf26Q96N11 449 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 PCDH9Q9HC56 1237 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 IQANK1A0A1B0GTG1 560 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 MDM4O15151 490 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 LRCH4O75427 683 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TFAP2AP05549 437 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 PEX2P28328 305 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 ADARP55265 1226 aaKnown RBP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 GAD2Q05329 585 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 CAMK1Q14012 370 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TAF12Q16514 161 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 MSS51Q4VC12 460 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 KLHDC10Q6PID8 442 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 C1orf228Q6PIY5 440 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 FAM131BQ86XD5 332 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SLC7A14Q8TBB6 771 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SHKBP1Q8TBC3 707 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SPPL2BQ8TCT7 592 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 BTBD9Q96Q07 612 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 NMUR1Q9HB89 426 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TLR9Q9NR96 1032 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 GMIPQ9P107 970 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SOX13Q9UN79 622 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 KIAA1671Q9BY89 1806 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 C15orf38-AP3S2A0A0A6YYH1 394 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TXNDC9O14530 226 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TGM5O43548 720 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 TBX18O95935 607 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 HAPLN1P10915 354 aaPredicted RBP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 CDK4P11802 303 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 IL1R2P27930 398 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 CPOXP36551 454 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 VCPP55072 806 aaKnown RBP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SNX16P57768 344 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 OASLQ15646 514 aaKnown RBP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 FNBP1LQ5T0N5 605 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 BSPRYQ5W0U4 402 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SH2D5Q6ZV89 423 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 SLC26A9Q7LBE3 791 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 ARPINQ7Z6K5 226 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 PCGF5Q86SE9 256 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 ARID3BQ8IVW6 561 aaPredicted RBP12.86□□□□□ -0.35
PRPF6-201ENST00000266079 RCOR2Q8IZ40 523 aa12.86□□□□□ -0.35
PRPF6-201ENST00000266079 KCTD13Q8WZ19 329 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms