RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 GLT1D1Q96MS3 346 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 APBA2Q99767 749 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 WDR41Q9HAD4 459 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 FANCEQ9HB96 536 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 ITM2CQ9NQX7 267 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 C20orf96Q9NUD7 363 aaPredicted RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 GDAP2Q9NXN4 497 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 VAV3Q9UKW4 847 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 CNOT6Q9ULM6 557 aaKnown RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 DRG1Q9Y295 367 aaKnown RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 RGS13O14921 159 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 PITRM1Q5JRX3 1037 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 DRICH1Q6PGQ1 229 aaPredicted RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 NPNTQ6UXI9 565 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 ZBTB49Q6ZSB9 765 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 FAM160B2Q86V87 743 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 TNS4Q8IZW8 715 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 CBR4Q8N4T8 237 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 BHMTQ93088 406 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 NKD2Q969F2 451 aaPredicted RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 ZNF668Q96K58 619 aaPredicted RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 RPL10LQ96L21 214 aaKnown RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 PGLYRP2Q96PD5 576 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 RETREG1Q9H6L5 497 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 AS3MTQ9HBK9 375 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 CNOT11Q9UKZ1 510 aaKnown RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 HES2Q9Y543 173 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 PCDHGA7Q9Y5G6 932 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 FER1L6Q2WGJ9 1857 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 DNAH12Q6ZR08 3092 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 ILVBLA1L0T0 632 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 FAM155AB1AL88 458 aaPredicted RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 MEN1O00255 615 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 TPPPO94811 219 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 KCNK2O95069 426 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 VAPBO95292 243 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 MAP3K6O95382 1288 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 RFX1P22670 979 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 ME2P23368 584 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 CRHR1P34998 444 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 PIGFQ07326 219 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 MAPRE1Q15691 268 aaKnown RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 DGKDQ16760 1214 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 PPP1R3AQ16821 1122 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 Q3C1V9 767 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 CEP55Q53EZ4 464 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 UGT3A1Q6NUS8 523 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 TMC5Q6UXY8 1006 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 GLRX5Q86SX6 157 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 HACE1Q8IYU2 909 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 ZNF420Q8TAQ5 688 aaPredicted RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 FIG4Q92562 907 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 LHPPQ9H008 270 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 NEK6Q9HC98 313 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 AKIP1Q9NQ31 210 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 PLSCR3Q9NRY6 295 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 CYP3A7-CYP3A51PA0A087WV96 503 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 TRIM64A6NGJ6 449 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 ARNTP27540 789 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 IFNA8P32881 189 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 NOVP48745 357 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 PGGT1BP53609 377 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 YWHAZP63104 245 aaKnown RBP8.9□□□□□ -0.98
VAPB-201ENST00000265619 TAF5Q15542 800 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 NFIL3Q16649 462 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 PPP1R18Q6NYC8 613 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 NACC1Q96RE7 527 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 CALN1Q9BXU9 219 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 RAB20Q9NX57 234 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 C3orf70A6NLC5 250 aaPredicted RBP8.9□□□□□ -0.98
VAPB-201ENST00000265619 ZNF839A8K0R7 811 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 ERVH48-1M5A8F1 160 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 TAF4O00268 1085 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 PGK2P07205 417 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 CDH1P12830 882 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 ELK4P28324 431 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 CYP2C18P33260 490 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 P2RX3P56373 397 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 GALK2Q01415 458 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 KRT76Q01546 638 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 AP3B2Q13367 1082 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 DPYSL3Q14195 570 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 SMU1Q2TAY7 513 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 CATSPEREQ5SY80 951 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 EPGNQ6UW88 154 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 C11orf96Q7Z7L8 435 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 SLC22A15Q8IZD6 547 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 PARP8Q8N3A8 854 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 CMASQ8NFW8 434 aaPredicted RBP8.9□□□□□ -0.98
VAPB-201ENST00000265619 OR13F1Q8NGS4 319 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 CYGBQ8WWM9 190 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 ZNF347Q96SE7 839 aa8.9□□□□□ -0.98
VAPB-201ENST00000265619 TPST1O60507 370 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 CST8O60676 142 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 FOSP01100 380 aaPredicted RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 ALDOAP04075 364 aaKnown RBP8.89□□□□□ -0.99
VAPB-201ENST00000265619 CHRNGP07510 517 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 TMEM191BP0C7N4 346 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 BMP4P12644 408 aa8.89□□□□□ -0.99
VAPB-201ENST00000265619 GLDCP23378 1020 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms