RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 OXSMQ9NWU1 459 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 ATXN10Q9UBB4 475 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 STAP1Q9ULZ2 295 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 PIN4Q9Y237 131 aaKnown RBP12.59□□□□□ -0.39
CHMP3-201ENST00000263856 MATN2O00339 956 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 TIMM44O43615 452 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 HUS1O60921 280 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 RNASEH2AO75792 299 aaKnown RBP12.59□□□□□ -0.39
CHMP3-201ENST00000263856 TNFAIP8O95379 198 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 MPOP05164 745 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 PSMC3P17980 439 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 ETFBP38117 255 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 TKTL1P51854 596 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 CSHL1Q14406 222 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 PCSK7Q16549 785 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 NPWQ8N729 165 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 RNF169Q8NCN4 708 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 PRICKLE1Q96MT3 831 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-201ENST00000263856 BTBD9Q96Q07 612 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 HAPLN3Q96S86 360 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 CIB1Q99828 191 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 EPS15L1Q9UBC2 864 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 GJD2Q9UKL4 321 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 COPG1Q9Y678 874 aaKnown RBP12.59□□□□□ -0.39
CHMP3-201ENST00000263856 POLR2AP24928 1970 aaKnown RBP12.58□□□□□ -0.39
CHMP3-201ENST00000263856 ZCWPW2A0A1B0GU75 182 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 H3BRB1 525 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 VILLO15195 856 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 GPC4O75487 556 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 ASLP04424 464 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 GLDCP23378 1020 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 PCSK6P29122 969 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 GALK1P51570 392 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF423Q2M1K9 1284 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 ANO4Q32M45 955 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 AGKQ53H12 422 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 C9orf57Q5W0N0 161 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 ZDHHC17Q8IUH5 632 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 TTC39CQ8N584 583 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 RP9Q8TA86 221 aaKnown RBP12.58□□□□□ -0.4
CHMP3-201ENST00000263856 GRIN3AQ8TCU5 1115 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 ULBP1Q9BZM6 244 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 TUT1Q9H6E5 874 aaKnown RBP12.58□□□□□ -0.4
CHMP3-201ENST00000263856 GMPR2Q9P2T1 348 aaKnown RBP12.58□□□□□ -0.4
CHMP3-201ENST00000263856 USP3Q9Y6I4 520 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 PMPCBO75439 489 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 AP2A1O95782 977 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 FAM200BP0CF97 657 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 IGFBP6P24592 240 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-201ENST00000263856 CDH15P55291 814 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 XIAPP98170 497 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 LAMC2Q13753 1193 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 DBN1Q16643 649 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 MTX3Q5HYI7 312 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 ARMCX2Q7L311 632 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 TMIGD2Q96BF3 282 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 TMEM79Q9BSE2 394 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 MLPHQ9BV36 600 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-201ENST00000263856 POMKQ9H5K3 350 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 PLEKHA5Q9HAU0 1116 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 AURKCQ9UQB9 309 aa12.58□□□□□ -0.4
CHMP3-201ENST00000263856 ARHGEF37A1IGU5 675 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 GRID2O43424 1007 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 ALOX15P16050 662 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-201ENST00000263856 EPHX2P34913 555 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 PRKAA1Q13131 559 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 GRM2Q14416 872 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 STRADAQ7RTN6 431 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 RYBPQ8N488 228 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-201ENST00000263856 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 COQ10BQ9H8M1 238 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 BCAP29Q9UHQ4 241 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-201ENST00000263856 TMEM114B3SHH9 223 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 NRP1O14786 923 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 DDHD2O94830 711 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 GLUD2P49448 558 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 GRIK4Q16099 956 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 PPP1R3AQ16821 1122 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 PIGGQ5H8A4 983 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 OR9I1Q8NGQ6 314 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 KBTBD7Q8WVZ9 684 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 CENPIQ92674 756 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-201ENST00000263856 RIMS3Q9UJD0 308 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 PRPF19Q9UMS4 504 aaKnown RBP12.57□□□□□ -0.4
CHMP3-201ENST00000263856 ACOT9Q9Y305 439 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 BPTFQ12830 3046 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 SAC3D1A6NKF1 404 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF839A8K0R7 811 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 C9IYK1 514 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 CASQ2O14958 399 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-201ENST00000263856 AKAP10O43572 662 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 DLX3O60479 287 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 CYP2C8P10632 490 aa12.57□□□□□ -0.4
CHMP3-201ENST00000263856 CKMT2P17540 419 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms