RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ETNK1Q9HBU6 452 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 NT5MQ9NPB1 228 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 GDF3Q9NR23 364 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 GRHL1Q9NZI5 618 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 UBP1Q9NZI7 540 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 KLHL8Q9P2G9 620 aaPredicted RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 GGA2Q9UJY4 613 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 FBXO10Q9UK96 956 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 TARSL2A2RTX5 802 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ARNTLO00327 626 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 TP73O15350 636 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 HOXC11O43248 304 aaPredicted RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 SMAD6O43541 496 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 NARSO43776 548 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 CACNG3O60359 315 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 PABPC1P11940 636 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 NFKB1P19838 968 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 PSMB4P28070 264 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 GJA4P35212 333 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 OPRD1P41143 372 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 DGKGP49619 791 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ITGA8P53708 1063 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 IFI35P80217 286 aaPredicted RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 BASP1P80723 227 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ITKQ08881 620 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 PDAP1Q13442 181 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 OLIG2Q13516 323 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 LBRQ14739 615 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 CYTH1Q15438 398 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 MARC1Q5VT66 337 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 IZUMO3Q5VZ72 239 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 TIGD7Q6NT04 549 aaPredicted RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ZDHHC24Q6UX98 284 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ZNF783Q6ZMS7 281 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ADIPOR2Q86V24 386 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 LRRC49Q8IUZ0 686 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 ETFBKMTQ8IXQ9 262 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 SLC44A3Q8N4M1 653 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 CPA6Q8N4T0 437 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 SPATA22Q8NHS9 363 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 SEC14L1Q92503 715 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 MAML1Q92585 1016 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 TEKT5Q96M29 485 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 XPO6Q96QU8 1125 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 IL12RB2Q99665 862 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 RAB17Q9H0T7 212 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 FBRSL1Q9HCM7 1045 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 RAB6BQ9NRW1 208 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 HPCAL4Q9UM19 191 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 NFU1Q9UMS0 254 aa9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 FCF1Q9Y324 198 aaKnown RBP9.92□□□□□ -0.82
SNRNP40-201ENST00000263694 F5P12259 2224 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 GOLGA8MH3BSY2 632 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 STK10O94804 968 aaKnown RBP9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 ACTN2P35609 894 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 MMP13P45452 471 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 RGRP47804 291 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 PLK1P53350 603 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 PLTPP55058 493 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 TUBB4BP68371 445 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 ZNF33AQ06730 810 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 NR1H3Q13133 447 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 MTM1Q13496 603 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 HNRNPDQ14103 355 aaKnown RBP9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 SPARCL1Q14515 664 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 IHHQ14623 411 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 ITPRIPL2Q3MIP1 535 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 MBLAC2Q68D91 279 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 CCNI2Q6ZMN8 369 aaPredicted RBP9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 KIAA0907Q7Z7F0 614 aaPredicted RBP9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 IFT20Q8IY31 132 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 TSEN2Q8NCE0 465 aaKnown RBP9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 CYB5D2Q8WUJ1 264 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 CPT1BQ92523 772 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 NXPE3Q969Y0 559 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 SNF8Q96H20 258 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 EXOC2Q96KP1 924 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 NSMCE3Q96MG7 304 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 PAK5Q9P286 719 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 UBA2Q9UBT2 640 aaPredicted RBP9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 TCF20Q9UGU0 1960 aaKnown RBP9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 RSPH14Q9UHP6 348 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 SLCO3A1Q9UIG8 710 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 ANAPC5Q9UJX4 755 aa9.91□□□□□ -0.82
SNRNP40-201ENST00000263694 KIAA1549LQ6ZVL6 1849 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 PRRT4C9JH25 899 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 DNALI1O14645 258 aaPredicted RBP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 MTSS1O43312 755 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 OPHN1O60890 802 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 NEBLO76041 1014 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 TMCC1O94876 653 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 SEC31AO94979 1220 aaKnown RBP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 MT-CYBP00156 380 aaPredicted RBP9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 FAM153BP0C7A2 387 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 ECHS1P30084 290 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 RENBPP51606 427 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 DSC2Q02487 901 aa9.9□□□□□ -0.82
SNRNP40-201ENST00000263694 NIPAL4Q0D2K0 466 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms