RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ELOVL4Q9GZR5 314 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 DNAI2Q9GZS0 605 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 TRNAU1APQ9NX07 287 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 ANKRD6Q9Y2G4 727 aa11.68□□□□□ -0.54
TROAP-201ENST00000257909 CTDP1Q9Y5B0 961 aaPredicted RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 MYO18AQ92614 2054 aaKnown RBP11.68□□□□□ -0.54
TROAP-201ENST00000257909 SOCS2O14508 198 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 GRAP2O75791 330 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ASNSP08243 561 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 KRT19P08727 400 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 HSPA8P11142 646 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 HADHAP40939 763 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 RXRGP48443 463 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 BMXP51813 675 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 PMS2P3Q13401 168 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 RAB39AQ14964 217 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 AARS2Q5JTZ9 985 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 GLRA4Q5JXX5 417 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 BSPRYQ5W0U4 402 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ANKRD26P1Q6NSI1 321 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 EEPD1Q7L9B9 569 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ERMP1Q7Z2K6 904 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 UBA3Q8TBC4 463 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 LPAR1Q92633 364 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ATXN7L3BQ96GX2 97 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 MARK4Q96L34 752 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 TWNKQ96RR1 684 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 TUBA1CQ9BQE3 449 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 C1orf50Q9BV19 199 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ADI1Q9BV57 179 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 EIF2AQ9BY44 585 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 TSPYL2Q9H2G4 693 aaPredicted RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 LRRC40Q9H9A6 602 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 GBA2Q9HCG7 927 aaPredicted RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 SPATA7Q9P0W8 599 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 SEPT3Q9UH03 358 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ERGIC3Q9Y282 383 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 MAFBQ9Y5Q3 323 aaPredicted RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 IQCA1LA6NCM1 817 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 KCNU1A8MYU2 1149 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 CFAP99D6REC4 459 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 MSCO60682 206 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 GRSF1Q12849 480 aaKnown RBP eCLIP11.67□□□□□ -0.54
TROAP-201ENST00000257909 MERTKQ12866 999 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ATP1A4Q13733 1029 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 LRP8Q14114 963 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 FRG1Q14331 258 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 NR1D2Q14995 579 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 FGD3Q5JSP0 725 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 SAMD4BQ5PRF9 694 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
TROAP-201ENST00000257909 PIWIL1Q96J94 861 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 MAELQ96JY0 434 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 HEXIM2Q96MH2 286 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 OLFM1Q99784 485 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 TASP1Q9H6P5 420 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 CD320Q9NPF0 282 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 C8orf4Q9NR00 106 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ZNF302Q9NR11 478 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 ATAD3AQ9NVI7 634 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 SMOXQ9NWM0 555 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 PIH1D1Q9NWS0 290 aaKnown RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 CACNA2D2Q9NY47 1150 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 DTLQ9NZJ0 730 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 CD300AQ9UGN4 299 aa11.67□□□□□ -0.54
TROAP-201ENST00000257909 GPC6Q9Y625 555 aaPredicted RBP11.67□□□□□ -0.54
TROAP-201ENST00000257909 PRORSD1PA6NEY8 169 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 TIPRLO75663 272 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 C7P10643 843 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 NAGLUP54802 743 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 CSE1LP55060 971 aaKnown RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 BNIP3Q12983 259 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 GK5Q6ZS86 529 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 DHFR2Q86XF0 187 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 ANKRD52Q8NB46 1076 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 PDPRQ8NCN5 879 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 NIFKQ9BYG3 293 aaKnown RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 ADAMTS10Q9H324 1103 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 TUT1Q9H6E5 874 aaKnown RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 CYP3A43Q9HB55 503 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 GIN1Q9NXP7 522 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 GGA3Q9NZ52 723 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 KIAA1522Q9P206 1035 aaPredicted RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 HMGXB4Q9UGU5 601 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 GTF2IRD1Q9UHL9 959 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 F5H423 210 aaPredicted RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 GOLGA8TH3BQL2 631 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 TMX2-CTNND1H3BSU7 103 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 RGS20O76081 388 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 DDHD2O94830 711 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 RPL10P27635 214 aaKnown RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 EIF2B2P49770 351 aaKnown RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 RPS3AP61247 264 aaKnown RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 GALNT2Q10471 571 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 FSTL1Q12841 308 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 BAATQ14032 418 aaPredicted RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 DLG2Q15700 870 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 SMAD1Q15797 465 aaKnown RBP11.66□□□□□ -0.54
TROAP-201ENST00000257909 SLC36A3Q495N2 470 aa11.66□□□□□ -0.54
TROAP-201ENST00000257909 EGFLAMQ63HQ2 1017 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms