RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ECT2LQ008S8 904 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 UBAP2LQ14157 1087 aaKnown RBP13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 FAM187BQ17R55 369 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 XKR3Q5GH77 459 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 FNBP1LQ5T0N5 605 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 RNF149Q8NC42 400 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 LPAR1Q92633 364 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 PTGFRNQ9P2B2 879 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 GNG14A0A1W2PPG7 69 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 C2orf81A6NN90 581 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 PRR5-ARHGAP8B1AHC4 643 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 OR6B1O95007 311 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 YES1P07947 543 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 NR3C2P08235 984 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 CYP2C9P11712 490 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 CYP11B2P19099 503 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 ARHGAP8P85298 464 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 TRIM32Q13049 653 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 ECHDC2Q86YB7 292 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 C10orf53Q8N6V4 93 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 PIK3R3Q92569 461 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 SLC9A7Q96T83 725 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 RTKNQ9BST9 563 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 EBF2Q9HAK2 575 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 CRLS1Q9UJA2 301 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 LEF1Q9UJU2 399 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 OR14I1A6ND48 311 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 I3L521 148 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 PLK4O00444 970 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 NAGLUP54802 743 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 PRKCQQ04759 706 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 KHDC1Q4VXA5 237 aaKnown RBP13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 SPANXN3Q5MJ09 141 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 KCNK18Q7Z418 384 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 OR8H3Q8N146 312 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 FBXO39Q8N4B4 442 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 RBM15BQ8NDT2 890 aaKnown RBP13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 ACMSDQ8TDX5 336 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 MAGEE1Q9HCI5 957 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 ETNK2Q9NVF9 386 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 RPS6KA6Q9UK32 745 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 RABL2BQ9UNT1 228 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 CLCA2Q9UQC9 943 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 A0A0X1KG70 313 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 TTLL13PA6NNM8 815 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 ORC5O43913 435 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 NOS3P29474 1203 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 TWF1Q12792 350 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 HMBOX1Q6NT76 420 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 HM13Q8TCT9 377 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 TP53INP1Q96A56 240 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 TBATAQ96M53 351 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 ACOX2Q99424 681 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 TBCDQ9BTW9 1192 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 NOL11Q9H8H0 719 aaKnown RBP13.32□□□□□ -0.28
PCDHGA3-201ENST00000253812 VAPBO95292 243 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 LSM8O95777 96 aaKnown RBP13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 C16orf46Q6P387 395 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 METTL6Q8TCB7 284 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 USP18Q9UMW8 372 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 NWD1Q149M9 1564 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 E7ENX8 843 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 CST1P01037 141 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 CHRNGP07510 517 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 DSG3P32926 999 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 S100A3P33764 101 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 HNF4AP41235 474 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 CCNG1P51959 295 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 TMEM132DQ14C87 1099 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 MED22Q15528 200 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 SWI5Q1ZZU3 235 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 PHC2Q8IXK0 858 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 COLGALT1Q8NBJ5 622 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 OR56A4Q8NGH8 313 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 BLOC1S5Q8TDH9 187 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 EMILIN2Q9BXX0 1053 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 BARX2Q9UMQ3 279 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 PLA2G6O60733 806 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 IL18RAPO95256 599 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 IFNA7P01567 189 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 HERC3Q15034 1050 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 C6orf52Q5T4I8 152 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 PRR23CQ6ZRP0 262 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 CXXC5Q7LFL8 322 aaKnown RBP13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 TRABD2AQ86V40 505 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 ALYREFQ86V81 257 aaKnown RBP13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 P2RY8Q86VZ1 359 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 SEMA4DQ92854 862 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 PPP1R14AQ96A00 147 aa13.31□□□□□ -0.28
PCDHGA3-201ENST00000253812 VPS35Q96QK1 796 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms