RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 RBM23Q86U06 439 aaKnown RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 B3GALNT2Q8NCR0 500 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 IRGQQ8WZA9 623 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 EPB41L4BQ9H329 900 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 SLC7A8Q9UHI5 535 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 CDH9Q9ULB4 789 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 SQORQ9Y6N5 450 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 C2orf81A6NN90 581 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 NUDT2P50583 147 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 APLP1P51693 650 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 FOXD4Q12950 439 aaPredicted RBP11.15□□□□□ -0.63
COPA-201ENST00000241704 C15orf59Q2T9L4 293 aaPredicted RBP11.15□□□□□ -0.63
COPA-201ENST00000241704 DCAF12L1Q5VU92 463 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 POLNQ7Z5Q5 900 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 PRUNE1Q86TP1 453 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 PIGZQ86VD9 579 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 SLC26A11Q86WA9 606 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 HTR3CQ8WXA8 447 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 WNT8BQ93098 351 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 LHX5Q9H2C1 402 aa11.15□□□□□ -0.63
COPA-201ENST00000241704 TBC1D3BA6NDS4 549 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 FSCN2O14926 492 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 MAGEB3O15480 346 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 DAB1O75553 588 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 SMPD1P17405 629 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 MMP8P22894 467 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 ZBTB41Q5SVQ8 909 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 FAM183BPQ6ZVS7 135 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 PQLC1Q8N2U9 271 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 NXF3Q9H4D5 531 aaKnown RBP11.14□□□□□ -0.63
COPA-201ENST00000241704 DDX28Q9NUL7 540 aaKnown RBP11.14□□□□□ -0.63
COPA-201ENST00000241704 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
COPA-201ENST00000241704 USP54Q70EL1 1684 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 SLC9A3R1O14745 358 aaPredicted RBP11.14□□□□□ -0.63
COPA-201ENST00000241704 USP17L7P0C7H9 530 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 ADSSP30520 456 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 TTKP33981 857 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 EGFLAMQ63HQ2 1017 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 BNC2Q6ZN30 1099 aaPredicted RBP11.14□□□□□ -0.63
COPA-201ENST00000241704 CACUL1Q86Y37 369 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 TDRPQ86YL5 185 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 AHI1Q8N157 1196 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 LZTR1Q8N653 840 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 C12orf50Q8NA57 414 aaPredicted RBP11.14□□□□□ -0.63
COPA-201ENST00000241704 SLC39A10Q9ULF5 831 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 HACD1B0YJ81 288 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 CXCL14O95715 111 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 BCL10O95999 233 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 GNRH1P01148 92 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 ATP13A4Q4VNC1 1196 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 LLGL2Q6P1M3 1020 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 AMIGO2Q86SJ2 522 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 TNIP2Q8NFZ5 429 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 ADAM32Q8TC27 787 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 PLEKHO2Q8TD55 490 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 NCSTNQ92542 709 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 COPS7BQ9H9Q2 264 aaPredicted RBP11.14□□□□□ -0.63
COPA-201ENST00000241704 SRRDQ9UH36 339 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 PSMD13Q9UNM6 376 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 COQ4Q9Y3A0 265 aa11.14□□□□□ -0.63
COPA-201ENST00000241704 SH3PXD2BA1X283 911 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 RAMP2O60895 175 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 SERPINA6P08185 405 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 MBTD1Q05BQ5 628 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 PSMD5Q16401 504 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 CYP1B1Q16678 543 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 CGB2Q6NT52 195 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 KCNT2Q6UVM3 1135 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 LRRC8DQ7L1W4 858 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 AGR3Q8TD06 166 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 PANX3Q96QZ0 392 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 PDZD7Q9H5P4 517 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 COG4Q9H9E3 785 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 ATP13A1Q9HD20 1204 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 SSU72Q9NP77 194 aaKnown RBP11.13□□□□□ -0.63
COPA-201ENST00000241704 CROTQ9UKG9 612 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 TCRBV7S2A1N4TA0A589 114 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 FBP2O00757 339 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 PMM2O15305 246 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 HDCP19113 662 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 ATP5C1P36542 298 aaKnown RBP11.13□□□□□ -0.63
COPA-201ENST00000241704 SERPINB10P48595 397 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 CSE1LP55060 971 aaKnown RBP11.13□□□□□ -0.63
COPA-201ENST00000241704 SFT2D3Q587I9 215 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 SETD3Q86TU7 594 aaPredicted RBP11.13□□□□□ -0.63
COPA-201ENST00000241704 TRIM15Q9C019 465 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.633e-6■■□□□ 14.1
COPA-201ENST00000241704 ING2Q9H160 280 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 BCAS3Q9H6U6 928 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 NUDT5Q9UKK9 219 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 TREHO43280 583 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 FBXW4P57775 412 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 RBBP7Q16576 425 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 C9orf57Q5W0N0 161 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 PDPK2PQ6A1A2 396 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 SLC24A5Q71RS6 500 aa11.13□□□□□ -0.63
COPA-201ENST00000241704 DDIASQ8IXT1 998 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms