RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 PDK1Q15118 436 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 CYP1B1Q16678 543 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 C6orf118Q5T5N4 469 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 AFMIDQ63HM1 303 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 APCDD1Q8J025 514 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 ATPAF2Q8N5M1 289 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.16□□□□□ -0.78
RTCB-201ENST00000216038 LZTR1Q8N653 840 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 C12orf50Q8NA57 414 aaPredicted RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 TFB1MQ8WVM0 346 aaKnown RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 E2F7Q96AV8 911 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 SPDL1Q96EA4 605 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 BRD9Q9H8M2 597 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 TPX2Q9ULW0 747 aaKnown RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 TBC1D30Q9Y2I9 924 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 HMGB1P1B2RPK0 211 aaPredicted RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 F5H423 210 aaPredicted RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 RAD51CO43502 376 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 SNAP91O60641 907 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 MAFKO60675 156 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 NFATC1O95644 943 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 ADH1CP00326 375 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 CHRNA3P32297 505 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 MDH1P40925 334 aaKnown RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 SLC6A11P48066 632 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 NDST2P52849 883 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 DR1Q01658 176 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 LMAN2Q12907 356 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 IFT88Q13099 833 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 RUNX3Q13761 415 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 SLC45A4Q5BKX6 768 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 TTMPQ5BVD1 217 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 MPP7Q5T2T1 576 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 LINGO4Q6UY18 593 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 SETD3Q86TU7 594 aaPredicted RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 CCDC117Q8IWD4 279 aaPredicted RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 USP33Q8TEY7 942 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 ARHGEF2Q92974 986 aaKnown RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 NKD2Q969F2 451 aaPredicted RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 TRIM51Q9BSJ1 452 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 FEM1AQ9BSK4 669 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 ATP13A1Q9HD20 1204 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 DNAJC17Q9NVM6 304 aaKnown RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 IPO11Q9UI26 975 aaKnown RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 VPS28Q9UK41 221 aa10.16□□□□□ -0.78
RTCB-201ENST00000216038 CORO1CQ9ULV4 474 aaPredicted RBP10.16□□□□□ -0.78
RTCB-201ENST00000216038 BPTFQ12830 3046 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 COL4A3Q01955 1670 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 ILVBLA1L0T0 632 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 ZSCAN5CA6NGD5 496 aaPredicted RBP10.15□□□□□ -0.78
RTCB-201ENST00000216038 ARHGAP42A6NI28 874 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 CHADO15335 359 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 AHCYL1O43865 530 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 FESP07332 822 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 MX2P20592 715 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 RPS6KA3P51812 740 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 SERINC3Q13530 473 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 PDGFRLQ15198 375 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 PARP15Q460N3 678 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 HEATR6Q6AI08 1181 aaKnown RBP10.15□□□□□ -0.78
RTCB-201ENST00000216038 C8orf74Q6P047 294 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 BZW1Q7L1Q6 419 aaKnown RBP10.15□□□□□ -0.78
RTCB-201ENST00000216038 SLC44A3Q8N4M1 653 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 ATL2Q8NHH9 583 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 FIBINQ8TAL6 211 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 ZNF419Q96HQ0 510 aaPredicted RBP10.15□□□□□ -0.78
RTCB-201ENST00000216038 ANKRD27Q96NW4 1050 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 QKIQ96PU8 341 aaKnown RBP eCLIP10.15□□□□□ -0.78
RTCB-201ENST00000216038 TRIM31Q9BZY9 425 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 MAGEH1Q9H213 219 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 PRDM16Q9HAZ2 1276 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 USP29Q9HBJ7 922 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 INTS6Q9UL03 887 aaKnown RBP10.15□□□□□ -0.78
RTCB-201ENST00000216038 TTLL3Q9Y4R7 772 aa10.15□□□□□ -0.78
RTCB-201ENST00000216038 ARNTLO00327 626 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 NCAM2O15394 837 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 NARSO43776 548 aaKnown RBP10.14□□□□□ -0.79
RTCB-201ENST00000216038 TULP3O75386 442 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 ECEL1O95672 775 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 ITGAVP06756 1048 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 ETFBP38117 255 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 PTGIRP43119 386 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 GAD2Q05329 585 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 KDSRQ06136 332 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 PPIDQ08752 370 aaKnown RBP10.14□□□□□ -0.79
RTCB-201ENST00000216038 PRKD1Q15139 912 aaPredicted RBP10.14□□□□□ -0.79
RTCB-201ENST00000216038 PPP1R7Q15435 360 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 GAB4Q2WGN9 574 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 SYCP2LQ5T4T6 812 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 CAPRIN2Q6IMN6 1127 aaKnown RBP10.14□□□□□ -0.79
RTCB-201ENST00000216038 DRICH1Q6PGQ1 229 aaPredicted RBP10.14□□□□□ -0.79
RTCB-201ENST00000216038 SFTPA1Q8IWL2 248 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 MREGQ8N565 214 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 ALLCQ8N6M5 410 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 DRAXINQ8NBI3 349 aaPredicted RBP10.14□□□□□ -0.79
RTCB-201ENST00000216038 CCDC110Q8TBZ0 833 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 HTR3CQ8WXA8 447 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.14□□□□□ -0.79
RTCB-201ENST00000216038 HDAC11Q96DB2 347 aa10.14□□□□□ -0.79
RTCB-201ENST00000216038 RPL10LQ96L21 214 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms