RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 POLR2EP19388 210 aaKnown RBP13.74□□□□□ -0.21
SF3A1-201ENST00000215793 ATP4AP20648 1035 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 CASP5P51878 434 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 AUHQ13825 339 aaKnown RBP13.74□□□□□ -0.21
SF3A1-201ENST00000215793 NEDD8Q15843 81 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 PFKFB4Q16877 469 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 NKX2-3Q8TAU0 364 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 TEKT5Q96M29 485 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 NCKAP1Q9Y2A7 1128 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 C2CD2Q9Y426 696 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 SLC9A3R1O14745 358 aaPredicted RBP13.74□□□□□ -0.21
SF3A1-201ENST00000215793 KPNA5O15131 536 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 NDUFB5O43674 189 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 NBNO60934 754 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 COX7A2P14406 83 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
SF3A1-201ENST00000215793 WSCD1Q658N2 575 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 RINLQ6ZS11 566 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 C15orf52Q6ZUT6 534 aaKnown RBP13.74□□□□□ -0.21
SF3A1-201ENST00000215793 ANKRD52Q8NB46 1076 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 LRRN4CLQ8ND94 238 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 SNRNP25Q9BV90 132 aaKnown RBP13.74□□□□□ -0.21
SF3A1-201ENST00000215793 HDHD2Q9H0R4 259 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 ALG9Q9H6U8 611 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 TAS2R14Q9NYV8 317 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 SNX6Q9UNH7 406 aa13.74□□□□□ -0.21
SF3A1-201ENST00000215793 KCNH1O95259 989 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 PSMG1O95456 288 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 MLYCDO95822 493 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 HIRAP54198 1017 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 TTC23Q5W5X9 447 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 FBXL19Q6PCT2 694 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 CDCA5Q96FF9 252 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 MLPHQ9BV36 600 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 FAM192AQ9GZU8 254 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 PAIP1Q9H074 479 aaKnown RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 SEMA4BQ9NPR2 832 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 PCDHA11Q9Y5I1 949 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ASTN1O14525 1302 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ANKDD1BA6NHY2 528 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 PTGES3LE9PB15 166 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ZW10O43264 779 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 KLRC4O43908 158 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 MAFO75444 373 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 CCDC166P0CW27 439 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ATP6V1C1P21283 382 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 TTPAP49638 278 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 MAP1SQ66K74 1059 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 RD3Q7Z3Z2 195 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 VGLL2Q8N8G2 317 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 SKA1Q96BD8 255 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 PPP1R16AQ96I34 528 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 C6orf62Q9GZU0 229 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 RNPEPL1Q9HAU8 725 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 HMX1Q9NP08 348 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 KLQ9UEF7 1012 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 MEIS2O14770 477 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 SGTAO43765 313 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ADRB2P07550 413 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 CXCR2P25025 360 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 FLT3P36888 993 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ZC3H12AQ5D1E8 599 aaKnown RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 MIIPQ5JXC2 388 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 PIGZQ86VD9 579 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 SUSD6Q92537 303 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 GGA2Q9UJY4 613 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 FBXO10Q9UK96 956 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 BCL9O00512 1426 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 HMGB3O15347 200 aaKnown RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ERBB2P04626 1255 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 SCNN1GP51170 649 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 RTP1P59025 263 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 MRPS22P82650 360 aaKnown RBP13.73□□□□□ -0.21
SF3A1-201ENST00000215793 COX10Q12887 443 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ZACNQ401N2 412 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 HECTD3Q5T447 861 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 C11orf88Q6PI97 169 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 CATSPERGQ6ZRH7 1159 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 TRAPPC5Q8IUR0 188 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 ZNF276Q8N554 614 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 PPP1R14AQ96A00 147 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 SLITRK2Q9H156 845 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 MORF4L1Q9UBU8 362 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 DCCP43146 1447 aa13.73□□□□□ -0.21
SF3A1-201ENST00000215793 UNC5CO95185 931 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 NUDT17P0C025 328 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 SNRPD1P62314 119 aaKnown RBP13.72□□□□□ -0.21
SF3A1-201ENST00000215793 FAM183BPQ6ZVS7 135 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 PRELID2Q8N945 189 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 MAGEB10Q96LZ2 347 aaPredicted RBP13.72□□□□□ -0.21
SF3A1-201ENST00000215793 TINF2Q9BSI4 451 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 DAPK2Q9UIK4 370 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 GNPTGQ9UJJ9 305 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 PKNOX1P55347 436 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 TRIM25Q14258 630 aaKnown RBP13.72□□□□□ -0.21
SF3A1-201ENST00000215793 SQLEQ14534 574 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 PDK4Q16654 411 aa13.72□□□□□ -0.21
SF3A1-201ENST00000215793 RNF43Q68DV7 783 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms