RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ME2P23368 584 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 S100A3P33764 101 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 TMED10P49755 219 aaKnown RBP23.46■■□□□ 1.35
TARBP1-201ENST00000040877 VSTM1Q6UX27 236 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 ZNF655Q8N720 491 aaPredicted RBP23.46■■□□□ 1.35
TARBP1-201ENST00000040877 SAE1Q9UBE0 346 aaPredicted RBP23.46■■□□□ 1.35
TARBP1-201ENST00000040877 ATP6V1B1P15313 513 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 ERCC2P18074 760 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 ATP5F1P24539 256 aaPredicted RBP23.46■■□□□ 1.35
TARBP1-201ENST00000040877 CDC25CP30307 473 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 NPNTQ6UXI9 565 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 PRELID2Q8N945 189 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 RCOR3Q9P2K3 495 aaPredicted RBP23.46■■□□□ 1.35
TARBP1-201ENST00000040877 CLUHO75153 1309 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 GSTM1P09488 218 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 CCL23P55773 120 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 RPS7P62081 194 aaKnown RBP23.46■■□□□ 1.35
TARBP1-201ENST00000040877 MRPS15P82914 257 aaKnown RBP23.46■■□□□ 1.35
TARBP1-201ENST00000040877 EFR3BQ9Y2G0 817 aa23.46■■□□□ 1.35
TARBP1-201ENST00000040877 SRRM3A6NNA2 597 aaPredicted RBP23.45■■□□□ 1.34
TARBP1-201ENST00000040877 PIGNO95427 931 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 TNNI3P19429 210 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 DENND1CQ8IV53 801 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 ART4Q93070 314 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 CORO1BQ9BR76 489 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 SLC39A8Q9C0K1 460 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 SLC25A52Q3SY17 297 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 NECAB2Q7Z6G3 386 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 BBS4Q96RK4 519 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 IGFLR1Q9H665 355 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 SNX8Q9Y5X2 465 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 PRR23D1E9PI22 279 aaPredicted RBP23.45■■□□□ 1.34
TARBP1-201ENST00000040877 UBXN8O00124 270 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 PRR23D2P0DMB1 279 aaPredicted RBP23.45■■□□□ 1.34
TARBP1-201ENST00000040877 LBPP18428 481 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 GNA13Q14344 377 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 NAIF1Q69YI7 327 aaPredicted RBP23.45■■□□□ 1.34
TARBP1-201ENST00000040877 USP6NLQ92738 828 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 SEMA3CQ99985 751 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 TBL1XO60907 577 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 MLYCDO95822 493 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 POU1F1P28069 291 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 ITGA7Q13683 1181 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 LCLAT1Q6UWP7 414 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 UNC5AQ6ZN44 842 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 EID3Q8N140 333 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 OMDQ99983 421 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 TTPALQ9BTX7 342 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 HTATIP2Q9BUP3 242 aa23.45■■□□□ 1.34
TARBP1-201ENST00000040877 PHGDHO43175 533 aaKnown RBP23.44■■□□□ 1.34
TARBP1-201ENST00000040877 CCNE2O96020 404 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 SOX6P35712 828 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 HSDL1Q3SXM5 330 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 POTEHQ6S545 545 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 BTBD7Q9P203 1132 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 SNX6Q9UNH7 406 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 PLIN4Q96Q06 1357 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 MED1Q15648 1581 aaPredicted RBP23.44■■□□□ 1.34
TARBP1-201ENST00000040877 UBR1Q8IWV7 1749 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 TLR5O60602 858 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 MAGEC1O60732 1142 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 FGF1P05230 155 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 NEK3P51956 506 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 HK2P52789 917 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 SMAD3P84022 425 aaKnown RBP23.44■■□□□ 1.34
TARBP1-201ENST00000040877 C1DQ13901 141 aaKnown RBP23.44■■□□□ 1.34
TARBP1-201ENST00000040877 ECM1Q16610 540 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 GJC2Q5T442 439 aaPredicted RBP23.44■■□□□ 1.34
TARBP1-201ENST00000040877 PPP1R26Q5T8A7 1209 aaPredicted RBP23.44■■□□□ 1.34
TARBP1-201ENST00000040877 EBNA1BP2Q99848 306 aaKnown RBP23.44■■□□□ 1.34
TARBP1-201ENST00000040877 YDJCA8MPS7 323 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 IRF8Q02556 426 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 TMEM26Q6ZUK4 368 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 RDH11Q8TC12 318 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 RNF19AQ9NV58 838 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 KLHL20Q9Y2M5 609 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 LDLRP01130 860 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 GOT1P17174 413 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 TRIP4Q15650 581 aaPredicted RBP23.44■■□□□ 1.34
TARBP1-201ENST00000040877 CCDC142Q17RM4 750 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 ARCQ7LC44 396 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 ATAD3AQ9NVI7 634 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 RHBDL2Q9NX52 303 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 FAM50BQ9Y247 325 aa23.44■■□□□ 1.34
TARBP1-201ENST00000040877 LAG3P18627 525 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 FAM46CQ5VWP2 391 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 HLA-DQA1Q5Y7H0 255 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 IL27RAQ6UWB1 636 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 SYT12Q8IV01 421 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 PIWIL2Q8TC59 973 aaKnown RBP23.43■■□□□ 1.34
TARBP1-201ENST00000040877 SPPL2AQ8TCT8 520 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 FIG4Q92562 907 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 CEP44Q9C0F1 390 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 NXF3Q9H4D5 531 aaKnown RBP23.43■■□□□ 1.34
TARBP1-201ENST00000040877 ARHGAP28Q9P2N2 729 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 MYOM1P52179 1685 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 PPP1R11O60927 126 aaPredicted RBP23.43■■□□□ 1.34
TARBP1-201ENST00000040877 FTH1P02794 183 aa23.43■■□□□ 1.34
TARBP1-201ENST00000040877 PURAQ00577 322 aaKnown RBP23.43■■□□□ 1.34
TARBP1-201ENST00000040877 ENPEPQ07075 957 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms