RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Spag6Q9JLI7 507 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cacna1cQ01815 2139 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 ZxdbA2CE44 873 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm10720D3Z1I5 223 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mroh5E9PUJ8 762 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Nccrp1G3X9C2 266 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cyp2b10P12791 500 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 LdlrP35951 862 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Itga4Q00651 1039 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ptcd3Q14C51 685 aaKnown RBP9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mief2Q5NCS9 454 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 9930111J21Rik1Q5SVP0 844 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Klra8Q60682 266 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gpr65Q61038 337 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rad54bQ6PFE3 886 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tdpoz3Q717B4 365 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zswim3Q8CFL8 695 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Taf12Q8VE65 161 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gprc5bQ923Z0 410 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Efhc1Q9D9T8 648 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Trpm5Q9JJH7 1158 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sbno2Q7TNB8 1349 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm45233A0A0N4SVE0 221 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 HcrtO55241 130 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Chrna4O70174 629 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tpst1O70281 370 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PtprcP06800 1291 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ccr5P51682 354 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ano7Q14AT5 859 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Nr2c1Q505F1 590 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tex24Q5DP50 351 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rnf145Q5SWK7 663 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PrkciQ62074 595 aaKnown RBP9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ssx9Q6XAS3 170 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Trnp1Q80ZI1 223 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ppme1Q8BVQ5 386 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Stx5Q8K1E0 355 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ifi30Q9ESY9 248 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Actl7aQ9QY84 440 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cib1Q9Z0F4 191 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vmn1r2A2AMT6 306 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 A930018M24RikB7ZMY3 218 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm2832F7AEC7 200 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 F830016B08RikG3UWE2 416 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Grip2G3XA20 1042 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 MrasO08989 208 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Matn1P51942 500 aaKnown RBP9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 TankP70347 448 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Atp5jP97450 108 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fscn2Q32M02 492 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Plcl1Q3USB7 1096 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cfhr2Q4LDF6 332 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Nlrp9cQ66X01 1004 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 IqceQ6PCQ0 778 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ssxb3Q6XAS4 170 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Clec4b1Q7TS58 209 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sytl5Q80T23 753 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mis18bp1Q80WQ8 998 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mapkap1Q8BKH7 522 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rap2cQ8BU31 183 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Amz1Q8BVF9 502 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Osbpl6Q8BXR9 959 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sept11Q8C1B7 431 aaKnown RBP9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 ThtpaQ8JZL3 224 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ddx1Q91VR5 740 aaKnown RBP9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Acbd6Q9D061 282 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ppp2r3cQ9JK24 453 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm21964A0A1W2P7S4 437 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fibcd1A2AV25 459 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vmn2r74E9PW21 853 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 XntrpcF8VQM8 1264 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PpargP37238 505 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 TktP40142 623 aaKnown RBP9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Anxa5P48036 319 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Hspa8P63017 646 aaKnown RBP9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 SiaeP70665 541 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Htr1aQ64264 421 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gba2Q69ZF3 918 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Chst10Q6PGK7 356 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 ItpkcQ7TS72 678 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tmtc4Q8BG19 741 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Clptm1lQ8BXA5 539 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Q8BZE1 841 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 LipmQ8K2A6 422 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Nrbf2Q8VCQ3 287 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rxfp2Q91ZZ5 737 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PudpQ9D5U5 234 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fads3Q9JJE7 449 aa9.86□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Slc4a11A2AJN7 862 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Spin2dB1B0R2 236 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sh3pxd2aO89032 1124 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Faf1P54731 649 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Psme3P61290 254 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fam83fQ3UKU4 495 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Msi1Q61474 362 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zfp90Q61967 636 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 CochQ62507 552 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PigaQ64323 485 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mtmr10Q7TPM9 771 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pcdh20Q8BIZ0 952 aa9.85□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms