RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gm9774A0A0A6YVU8 407 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Fam171a2A2A699 822 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Creb1Q01147 341 aaKnown RBP23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Gspt2Q149F3 632 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Afap1l1Q8BZI0 768 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 NaprtQ8CC86 538 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Zfp263Q8CF60 680 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Anks3Q9CZK6 655 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Tssk3Q9D2E1 268 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Armc9Q9D2I5 817 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ephx1Q9D379 455 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 PrebQ9WUQ2 417 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 ApipQ9WVQ5 241 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sh3pxd2bA2AAY5 908 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Olfr414E9Q5P8 317 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 PargO88622 969 aaKnown RBP23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Kcnn2P58390 839 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Csf2raQ00941 388 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Zfp217Q3U0X6 1041 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Fbxo39Q5NBU5 443 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Mgat5bQ765H6 792 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ldlrap1Q8C142 308 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 NelfcdQ922L6 591 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 MceeQ9D1I5 178 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 MkksQ9JI70 570 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Mpp2Q9WV34 552 aa23.29■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Nos2P29477 1144 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Pitx1P70314 315 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Nlrp4fQ66X05 959 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 SnphQ80U23 495 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Cabs1Q8C633 391 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Q8CC96 669 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ccdc28bQ8CEG5 200 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Pnpt1Q8K1R3 783 aaKnown RBP23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 St13Q99L47 371 aaKnown RBP23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 SardhQ99LB7 919 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Rwdd4Q9CPR1 188 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Mphosph6Q9D1Q1 161 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ovca2Q9D7E3 225 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 ErmapQ9JLN5 566 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Zfp651E9PZ11 729 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Cav1P49817 178 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Pdss1Q33DR2 409 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Nt5dc3Q3UHB1 546 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Krt32Q62168 407 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Krt77Q6IFZ6 572 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Q80WR5 230 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ticam2Q8BJQ4 232 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Tmco6Q8BQX5 494 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Trerf1Q8BXJ2 1205 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Agap3Q8VHH5 910 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ophn1Q99J31 802 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Sf3a3Q9D554 501 aaKnown RBP23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Q9D979 236 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Adrm1Q9JKV1 407 aa23.28■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Gm11758A2BEI6 360 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Gm11757A2BEI8 360 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Fgf10O35565 209 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Atp2a2O55143 1044 aaKnown RBP23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 LifP09056 203 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 MaptP10637 733 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Itga4Q00651 1039 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Cnga4Q3UW12 575 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Olfr213Q7TS32 327 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Ipo11Q8K2V6 975 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Asz1Q8VD46 475 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 Nme3Q9WV85 169 aa23.27■■□□□ 1.32
Upf3a-201ENSMUST00000043767 JrklB2RRL2 523 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Ccdc170D3YXL0 722 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Vmn1r176G3UW31 304 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tnfrsf11bO08712 401 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 FaahO08914 579 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Myl4P09541 193 aaKnown RBP23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 SftpbP50405 377 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Aars2Q14CH7 980 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Foxr1Q3UTB7 268 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Cand1Q6ZQ38 1230 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Klhl29Q80T74 875 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 LipmQ8K2A6 422 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Hddc3Q9D114 179 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Spata9Q9D9R3 252 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Sdc4O35988 198 aaKnown RBP23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Hoxd11P23813 323 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Ccna2P51943 422 aaKnown RBP23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Arl4cP61208 192 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Fam81aQ3UXZ6 364 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Fam189bQ5HZJ5 669 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Nlrp4eQ66X19 978 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Ggnbp1Q6K1E7 370 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Rassf6Q80UQ2 353 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Q8C4P0 716 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Tas1r2Q925I4 843 aa23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Polr3hQ9D2C6 204 aaKnown RBP23.26■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Kcng1A2BDX4 514 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Gm16430A6X8J1 155 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Ndst2P52850 883 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 PrkcgP63318 697 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Glra2Q7TNC8 452 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Fbxl21Q8BFZ4 434 aa23.25■■□□□ 1.31
Upf3a-201ENSMUST00000043767 Aldh4a1Q8CHT0 562 aa23.25■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms