RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Kcnh1Q60603 989 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Traf3Q60803 567 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Prmt6Q6NZB1 378 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sort1Q6PHU5 825 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr299Q7TS05 330 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Elac2Q80Y81 831 aaKnown RBP11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 UnkQ8BL48 810 aaKnown RBP11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ccdc63Q8CDV6 558 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Rdh13Q8CEE7 334 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Micu1Q8VCX5 477 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Dapk2Q8VDF3 370 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Nsmce2Q91VT1 247 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Acot13Q9CQR4 140 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Lrrc17Q9CXD9 443 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ccdc77Q9CZH8 489 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Snx5Q9D8U8 404 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Prl2a1Q9JHK0 228 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cyb561d2Q9WUE3 222 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sf3b1Q99NB9 1304 aaKnown RBP11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ccdc194A0A140LIT1 234 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Akr1clQ3UXL1 322 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Trim17Q7TPM3 477 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr389Q7TRX7 312 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ric8bQ80XE1 520 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ints6lQ8BND4 861 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Lsm14aQ8K2F8 462 aaKnown RBP11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cyp2c50Q91X77 490 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Trem1Q9JKE2 230 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ptk2bQ9QVP9 1009 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Hcn3O88705 779 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 SnnP61807 88 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 McuQ3UMR5 350 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Elf3Q3UPW2 391 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Fam198aQ3UY90 562 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Srbd1Q497V5 1015 aaKnown RBP11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr463Q5SW49 311 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr462Q5SW50 311 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Creb3Q61817 404 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 MtbpQ8BJS8 894 aaKnown RBP11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ppp1r8Q8R3G1 351 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Smg8Q8VE18 991 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Rxfp2Q91ZZ5 737 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Me2Q99KE1 589 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 BlvraQ9CY64 295 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Rnft1Q9DCN7 395 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 LactbQ9EP89 551 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cpsf3Q9QXK7 684 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ercc2O08811 760 aaKnown RBP11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Magea6O89010 325 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Hoxc6P10629 235 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ccnb1P24860 430 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ldb1P70662 411 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Nutm2Q3V0C3 733 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Bcar1Q61140 874 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Il17aQ62386 158 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Letm2Q7TNU7 480 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ago3Q8CJF9 860 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Znf24Q91VN1 368 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Lypd3Q91YK8 363 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 TrirQ9D735 173 aa11.48□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vmn2r-ps130A0A140T8U3 855 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Mroh5E9PUJ8 762 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm6408J3QNG1 320 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 H2-M9O19442 342 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Stam2O88811 523 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Asgr1P34927 284 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Atp5bP56480 529 aaKnown RBP11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 SiaeP70665 541 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Itga4Q00651 1039 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Fam83hQ148V8 1209 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 CcnhQ61458 323 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr295Q7TS08 309 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sytl5Q80T23 753 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Map1sQ8C052 973 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 GaleQ8R059 347 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Olfr356Q8VFP5 315 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pwp1Q99LL5 501 aaKnown RBP11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 MutyhQ99P21 515 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Isl2Q9CXV0 359 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Dcp2Q9CYC6 422 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Col1a1P11087 1453 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 AlbP07724 608 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cd2P08920 344 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Khdrbs1Q60749 443 aaKnown RBP11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sox17Q61473 419 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Fam120bQ6RI63 786 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Spata21Q8BHW6 681 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Tmem154Q8C4Q9 181 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Leng1Q9DB98 261 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Trim15G3UY57 292 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Vmn2r61L7N2B8 865 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Npr3P70180 536 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Larp7Q05CL8 570 aaKnown RBP11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Zc3h15Q3TIV5 426 aaKnown RBP11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Gm4951Q3UED7 406 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Pfdn4Q3UWL8 134 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Cyp2c67Q569X9 491 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Sv2cQ69ZS6 727 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Wscd1Q80XH4 572 aa11.47□□□□□ -0.57
Topbp1-201ENSMUST00000035164 Ticam2Q8BJQ4 232 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms