RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Hist1h2afQ8CGP5 130 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 Hist1h2ahQ8CGP6 128 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 Hist1h2akQ8CGP7 130 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 H2afjQ8R1M2 129 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 Tex13bQ99MW5 186 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 Mrpl28Q9D1B9 257 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 Mapk9Q9WTU6 423 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 Orc6Q9WUJ8 262 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 B3galt4Q9Z0F0 371 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 CcniQ9Z2V9 377 aa10.96□□□□□ -0.65
Ciita-201ENSMUST00000023147 Gm5072A2AHM1 344 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gm5930D3Z257 264 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 4930523C07RikE9Q2T4 99 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Chst3O88199 472 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 HalP35492 657 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gabrb2P63137 512 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Sephs2P97364 452 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 1810065E05RikQ5NC41 235 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Cd34Q64314 382 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gja6Q6S5G4 283 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tbc1d13Q8R3D1 400 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Fam20bQ8VCS3 409 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Polr3hQ9D2C6 204 aaKnown RBP10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Duoxa2Q9D311 320 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 EmcnQ9R0H2 261 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Spata31d1aE9QA35 1336 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Atf6F6VAN0 656 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gm20695H3BLK7 282 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 EpoP07321 192 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gal3st3P61315 431 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Adcy6Q01341 1165 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 LvrnQ2KHK3 559 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Cyp2c66Q5GLZ0 490 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mapre3Q6PER3 281 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Glra2Q7TNC8 452 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 BspryQ80YW5 473 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Kat5Q8CHK4 513 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tdrd3Q91W18 743 aaKnown RBP10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 DgkgQ91WG7 788 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 VillQ91YD6 859 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Snx10Q9CWT3 201 aa10.96□□□□□ -0.66
Ciita-201ENSMUST00000023147 Hmox2O70252 315 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ncf4P97369 339 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Flt3Q00342 1000 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Best3Q6H1V1 669 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 PapolgQ6PCL9 739 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Q8BH50 245 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Crtc3Q91X84 619 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Echdc3Q9D7J9 300 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ddi1Q9DAF3 408 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ssxb9A2BI93 185 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Clk3O35492 638 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Nek2O35942 443 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 HmbsP22907 361 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ndufs6P52503 116 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Itga4Q00651 1039 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Eif2ak2Q03963 515 aaKnown RBP10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Serac1Q3U213 654 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Pcnx4Q3UVY5 1174 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 MelkQ61846 643 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Wee2Q66JT0 555 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Awat2Q6E1M8 333 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mical2Q8BML1 960 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tyw3Q8BSA9 257 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Cpsf7Q8BTV2 471 aaKnown RBP10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Commd2Q8BXC6 199 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Lrrc4cQ8C031 640 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tdrd1Q99MV1 1172 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Arl8bQ9CQW2 186 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Pin4Q9CWW6 131 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Actl7bQ9QY83 418 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Mpp2Q9WV34 552 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Vmn2r74E9PW21 853 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Spata31d1dE9Q5W2 1247 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Usp17ldG5E8G2 545 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Usp17lcG5E8I7 545 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 H2-Eb1P04230 264 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Fgfr2P21803 821 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 IppP28575 584 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Sesn1P58006 492 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tespa1Q3U132 458 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Gpr151Q7TSN6 422 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 BoraQ8BS90 525 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 NkrfQ8BY02 690 aaKnown RBP10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ace2Q8R0I0 805 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Msh4Q99MT2 958 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Q9CPS8 106 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Serpinb1aQ9D154 379 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tmem79Q9D709 391 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 XkQ9QXY7 446 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Hs6st1Q9QYK5 411 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Khdrbs2Q9WU01 349 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Tyw5A2RSX7 315 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Catsperg2C6KI89 1145 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 ChgbP16014 677 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 PcnaP17918 261 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Ag2Q3UPL5 249 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Nr2e1Q64104 385 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Fbxo10Q7TQF2 950 aa10.95□□□□□ -0.66
Ciita-201ENSMUST00000023147 Zcchc4Q8BKW4 512 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms