RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Bmp10Q9R229 421 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Aqp5Q9WTY4 265 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gbp11A9YVJ5 442 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Vmn2r61L7N2B8 865 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Kng1O08677 661 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Il2rbP16297 539 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 PrkcqQ02111 707 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Mup21Q80YX8 181 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Slc6a15Q8BG16 729 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Sephs1Q8BH69 392 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Itih5Q8BJD1 952 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Steap3Q8CI59 488 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Sh3d19Q91X43 789 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Chid1Q922Q9 393 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 St13Q99L47 371 aaKnown RBP11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Cmtm6Q9CZ69 183 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Armc1Q9D7A8 282 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Tubb3Q9ERD7 450 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Dpp7Q9ET22 506 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 PrebQ9WUQ2 417 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Mtmr1Q9Z2C4 669 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Zfp266E9Q2S7 604 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Cyp2j8G3UZ38 503 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Vmn2r65G3X931 845 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gm16427J3QN52 483 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Vmn2r15L7N2A0 855 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Sh3yl1O08641 340 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ifnar2O35664 513 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 MaptP10637 733 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Taf1bP97358 586 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Proser1Q5PRE5 913 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Sema5bQ60519 1093 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Wbp4Q61048 376 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Tcf12Q61286 706 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Pla2g4cQ64GA5 597 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Dlgap3Q6PFD5 977 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 FktnQ8R507 461 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ifi44lQ9BDB7 447 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 4933425L06RikQ9D3Z8 585 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Map3k20Q9ESL4 802 aaKnown RBP11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Hs6st3Q9QYK4 470 aa11.69□□□□□ -0.54
Sdc1-201ENSMUST00000020911 SisF8VQM5 1818 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Taf1Q80UV9 1891 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Zmynd12A2BGJ5 363 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Kcnt2D3Z649 1135 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Cdh19E9Q3A7 770 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Kcnj1O88335 372 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 CblP22682 913 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Kcnn3P58391 732 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Smad1P70340 465 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Nab1Q61122 486 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gja6Q6S5G4 283 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Trpv1Q704Y3 839 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 C2cd5Q7TPS5 1016 aaKnown RBP11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Clec4b1Q7TS58 209 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Amigo1Q80ZD8 492 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 ItchQ8C863 864 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Mfsd6Q8CBH5 775 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Znf467Q8JZL0 594 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Chchd6Q91VN4 273 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 4921530L21RikQ9CQ47 274 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Prelid3bQ9CYY7 195 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Tomm70Q9CZW5 611 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Dusp21Q9D9D8 189 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Smim23Q9DAL0 136 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 H2-OaQ9QWV1 250 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Cry2Q9R194 592 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Apobec2Q9WV35 224 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ccdc74aE9Q9U8 364 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 C1qbpO35658 278 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Mov10P23249 1004 aaKnown RBP11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Irf8P23611 424 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Slc1a1P51906 523 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Hpcal1P62748 193 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Rnf113a2Q14B01 337 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Nat8lQ3UGX3 299 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Pla2g4dQ50L43 825 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Lcn3Q62471 182 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Gm6377Q8BHV4 303 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Parp9Q8CAS9 866 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Fbxo43Q8CDI2 640 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Rcor1Q8CFE3 480 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ago2Q8CJG0 860 aaKnown RBP11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Klhl2Q8JZP3 593 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Kiaa0513Q8R0A7 407 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Zmynd11Q8R5C8 602 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 RnpepQ8VCT3 650 aaKnown RBP11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Taf12Q8VE65 161 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Olfr390Q8VEZ7 311 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Slco1a5Q91YY5 670 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Ugp2Q91ZJ5 508 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 OptcQ920A0 328 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Trim16Q99PP9 556 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Asb11Q9CQ31 323 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Mettl1Q9Z120 268 aa11.68□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Olfr652B9EHE6 318 aa11.67□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Trdmt1O55055 415 aa11.67□□□□□ -0.54
Sdc1-201ENSMUST00000020911 H2-K1P01901 369 aa11.67□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Alkbh1P0CB42 389 aa11.67□□□□□ -0.54
Sdc1-201ENSMUST00000020911 Sipa1P46062 1037 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 50.4 ms