RNA–Protein interactions for RNA: ENST00000637078.1

CACNA1D-221, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 4

Gene CACNA1D, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-221ENST00000637078 SH2D3CQ8N5H7 860 aa9.12□□□□□ -0.95
CACNA1D-221ENST00000637078 WDR36Q8NI36 951 aaKnown RBP9.12□□□□□ -0.95
CACNA1D-221ENST00000637078 ATXN7L3BQ96GX2 97 aa9.12□□□□□ -0.95
CACNA1D-221ENST00000637078 TRIM4Q9C037 500 aa9.12□□□□□ -0.95
CACNA1D-221ENST00000637078 ST7Q9NRC1 585 aa9.12□□□□□ -0.95
CACNA1D-221ENST00000637078 IL17BQ9UHF5 180 aa9.12□□□□□ -0.95
CACNA1D-221ENST00000637078 PCDHB4Q9Y5E5 795 aa9.12□□□□□ -0.95
CACNA1D-221ENST00000637078 MAST4O15021 2626 aa9.12□□□□□ -0.95
CACNA1D-221ENST00000637078 A0A1W2PNU3 283 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 CPED1A4D0V7 1026 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 EME2A4GXA9 379 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 KCNU1A8MYU2 1149 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 KPNA3O00505 521 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 PCDH8O95206 1070 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 TRUB2O95900 331 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 PRNPP04156 253 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 KRT10P13645 584 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 CMA1P23946 247 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 SYKP43405 635 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 CLDN2P57739 230 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 DPYDQ12882 1025 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 CLN3Q13286 438 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 NR0B2Q15466 257 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 ZNF542PQ5EBM4 170 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 SYPL2Q5VXT5 272 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 OR6B2Q6IFH4 312 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 GUSBP11Q6P575 273 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 FOXR1Q6PIV2 292 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 XKR5Q6UX68 686 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 KYAT3Q6YP21 454 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 Q6ZSR6 202 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 PARGQ86W56 976 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 ZNF548Q8NEK5 533 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 WDR48Q8TAF3 677 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 UBE2Q2Q8WVN8 375 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 GLMNQ92990 594 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 ARRDC3Q96B67 414 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 PRR11Q96HE9 360 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 PPP1R16AQ96I34 528 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 RPRD1AQ96P16 312 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 NT5C1BQ96P26 610 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 NOX5Q96PH1 765 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 CCNL2Q96S94 520 aaPredicted RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 TSG101Q99816 390 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 PRMT1Q99873 361 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 ARHGAP9Q9BRR9 750 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 SRRTQ9BXP5 876 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 POPDC2Q9HBU9 364 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 SALL4Q9UJQ4 1053 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 VPS28Q9UK41 221 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 ZFR2Q9UPR6 939 aaKnown RBP9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 HPSEQ9Y251 543 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 CSNK1G3Q9Y6M4 447 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 SCN8AQ9UQD0 1980 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 CFAP46Q8IYW2 2715 aa9.11□□□□□ -0.95
CACNA1D-221ENST00000637078 CCDC187A0A096LP49 1063 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 TPP1O14773 563 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 AQP9O43315 295 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 TNFSF15O95150 251 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 IGLV3-25P01717 112 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 CSF2P04141 144 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 CTSLP07711 333 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 ITGA2BP08514 1039 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 SLC2A3P11169 496 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 NME1P15531 152 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 CHRNA3P32297 505 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 RABIFP47224 123 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 RPL34P49207 117 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 RPIAP49247 311 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 KRT83P78385 493 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 CENPCQ03188 943 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 DNM1Q05193 864 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 MTA1Q13330 715 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 SPIDRQ14159 915 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 DEFB133Q30KQ1 61 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 ARL13BQ3SXY8 428 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 KIAA1161Q6NSJ0 714 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 CRTC1Q6UUV9 634 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 ATG14Q6ZNE5 492 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 ERN2Q76MJ5 926 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 ZSCAN30Q86W11 494 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 PPM1KQ8N3J5 372 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 TMIEQ8NEW7 156 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 NAT6Q93015 286 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 ALG14Q96F25 216 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 IL12RB2Q99665 862 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 ZSWIM1Q9BR11 485 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 FEM1AQ9BSK4 669 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 SYNDIG1Q9H7V2 258 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 CAAP1Q9H8G2 361 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 FAM204AQ9H8W3 233 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 GPR27Q9NS67 375 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 IPO11Q9UI26 975 aaKnown RBP9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 RCOR1Q9UKL0 485 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 ATXN7L1Q9ULK2 861 aaPredicted RBP9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 HS3ST2Q9Y278 367 aa9.1□□□□□ -0.95
CACNA1D-221ENST00000637078 HS3ST3A1Q9Y663 406 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms