RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 SIN3BO75182 1162 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 NEBLO76041 1014 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 POP4O95707 220 aaKnown RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 IL1BP01584 269 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PRNPP04156 253 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PTMAP06454 111 aaKnown RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 RETP07949 1114 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 CHRM1P11229 460 aaPredicted RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 SRCP12931 536 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 TNNT1P13805 278 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 C5AR1P21730 350 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 AMPD1P23109 780 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 KDELR1P24390 212 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 IL1R2P27930 398 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 CD6P30203 668 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 SLC8A1P32418 973 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 ACVRL1P37023 503 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 DHPSP49366 369 aaPredicted RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 NUMBP49757 651 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PAPOLAP51003 745 aaKnown RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 RENBPP51606 427 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 VAV2P52735 878 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 RPL6Q02878 288 aaKnown RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 SERINC3Q13530 473 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 CST6Q15828 149 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PLK5Q496M5 336 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 CARD16Q5EG05 197 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 USP30Q70CQ3 517 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 BZW1Q7L1Q6 419 aaKnown RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 DAAM2Q86T65 1068 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PLPP6Q8IY26 295 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 SYCE1Q8N0S2 351 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 STK40Q8N2I9 435 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 RYBPQ8N488 228 aaPredicted RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 OR52K2Q8NGK3 314 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 KIAA1524Q8TCG1 905 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 RLN3Q8WXF3 142 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PTPRN2Q92932 1015 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 ERLEC1Q96DZ1 483 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 MYO19Q96H55 970 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PPP1R16AQ96I34 528 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 CSPG4P5Q96PW8 444 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PSMB7Q99436 277 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 TSGA10Q9BZW7 698 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 MKRN2Q9H000 416 aaKnown RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 BTBD1Q9H0C5 482 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 SP110Q9HB58 689 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 SGK2Q9HBY8 427 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 PCDH18Q9HCL0 1135 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 UBA2Q9UBT2 640 aaPredicted RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 ZNF212Q9UDV6 495 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 CYP8B1Q9UNU6 501 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 SMG5Q9UPR3 1016 aaKnown RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 INVSQ9Y283 1065 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 ZFHX2Q9C0A1 2572 aaPredicted RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 RIF1Q5UIP0 2472 aaKnown RBP8.39□□□□□ -1.07
PNKP-226ENST00000636840 DOCK4Q8N1I0 1966 aa8.39□□□□□ -1.07
PNKP-226ENST00000636840 KIAA1549LQ6ZVL6 1849 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 NUP205Q92621 2012 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 LRRC72A6NJI9 287 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 PJA2O43164 708 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 BUB1BO60566 1050 aaPredicted RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 GFRA3O60609 400 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 PALMO75781 387 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RNASEH2AO75792 299 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 ZMPSTE24O75844 475 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 ZRANB2O95218 330 aaKnown RBP eCLIP8.38□□□□□ -1.07
PNKP-226ENST00000636840 MT-CO1P00395 513 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 MX2P20592 715 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 COMTP21964 271 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 CHRNA3P32297 505 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 SERPINH1P50454 418 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 TPMTP51580 245 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 COPAP53621 1224 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RHOAP61586 193 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RPS14P62263 151 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 SLC25A11Q02978 314 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 IL10RBQ08334 325 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 SRSF5Q13243 272 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 DPYSQ14117 519 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 TFDP2Q14188 446 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RFTN1Q14699 578 aaPredicted RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 GRM3Q14832 879 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 MAP7D1Q3KQU3 841 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 ATP13A4Q4VNC1 1196 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 ANKRD20A8PQ5CZ79 823 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 WDR45BQ5MNZ6 344 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 DAB2IPQ5VWQ8 1189 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 C22orf39Q6P5X5 142 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 LINGO4Q6UY18 593 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RAD9BQ6WBX8 426 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RABEPKQ7Z6M1 372 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 VSIG1Q86XK7 387 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 MMAAQ8IVH4 418 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 LRRC8AQ8IWT6 810 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RCOR2Q8IZ40 523 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RGL4Q8IZJ4 473 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms