RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LCP1P13796 627 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 PDGFRAP16234 1089 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 ZNF18P17022 549 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 DLG2Q15700 870 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 ACCSLQ4AC99 568 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 TMEM259Q4ZIN3 620 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 SEL1L3Q68CR1 1132 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 KYAT3Q6YP21 454 aaKnown RBP18.64■□□□□ 0.57
CLN6-212ENST00000636020 Q6ZVU0 165 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 LGI2Q8N0V4 545 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 UBA3Q8TBC4 463 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 IRGQQ8WZA9 623 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 GLMNQ92990 594 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 SLC39A13Q96H72 371 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 LRRC4CQ9HCJ2 640 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 EPB41L5Q9HCM4 733 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 HESX1Q9UBX0 185 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 XPO7Q9UIA9 1087 aaKnown RBP18.64■□□□□ 0.57
CLN6-212ENST00000636020 FRMD4BQ9Y2L6 1034 aa18.64■□□□□ 0.57
CLN6-212ENST00000636020 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.64■□□□□ 0.57
CLN6-212ENST00000636020 ZFC3H1O60293 1989 aaKnown RBP18.63■□□□□ 0.57
CLN6-212ENST00000636020 TRPM6Q9BX84 2022 aa18.63■□□□□ 0.57
CLN6-212ENST00000636020 PDXKO00764 312 aa18.63■□□□□ 0.57
CLN6-212ENST00000636020 HGFP14210 728 aa18.63■□□□□ 0.57
CLN6-212ENST00000636020 JUNDP17535 347 aa18.63■□□□□ 0.57
CLN6-212ENST00000636020 C1QBPQ07021 282 aaKnown RBP18.63■□□□□ 0.57
CLN6-212ENST00000636020 RABEP1Q15276 862 aa18.63■□□□□ 0.57
CLN6-212ENST00000636020 SEMA4DQ92854 862 aa18.63■□□□□ 0.57
CLN6-212ENST00000636020 SYNDIG1Q9H7V2 258 aa18.63■□□□□ 0.57
CLN6-212ENST00000636020 TLR6Q9Y2C9 796 aa18.63■□□□□ 0.57
CLN6-212ENST00000636020 SCN8AQ9UQD0 1980 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 TMX2-CTNND1H3BSU7 103 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 MAPK13O15264 365 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 PCDH8O95206 1070 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 MOCS2O96007 188 aaPredicted RBP18.62■□□□□ 0.57
CLN6-212ENST00000636020 LTFP02788 710 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 CTSLP07711 333 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 CCR10P46092 362 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 CCDC15Q0P6D6 951 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 STK4Q13043 487 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 DTX1Q86Y01 620 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 KIAA0895Q8NCT3 520 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 ALG14Q96F25 216 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 STRADBQ9C0K7 418 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 ANAPC2Q9UJX6 822 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 PADI4Q9UM07 663 aa18.62■□□□□ 0.57
CLN6-212ENST00000636020 GCATO75600 419 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 FYNP06241 537 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 SETSIPP0DME0 302 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 NNTQ13423 1086 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 CUL4BQ13620 913 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 FGL2Q14314 439 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 NCAPHQ15003 741 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 TPRG1LQ5T0D9 272 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 RAP1GAP2Q684P5 730 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 ZFAND4Q86XD8 727 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 CCAR2Q8N163 923 aaKnown RBP18.61■□□□□ 0.57
CLN6-212ENST00000636020 DQX1Q8TE96 717 aaKnown RBP18.61■□□□□ 0.57
CLN6-212ENST00000636020 SERPINB11Q96P15 392 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 SRRTQ9BXP5 876 aaKnown RBP18.61■□□□□ 0.57
CLN6-212ENST00000636020 FOXP3Q9BZS1 431 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 MMRN2Q9H8L6 949 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 MAGEF1Q9HAY2 307 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 PISDQ9UG56 409 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 IPO11Q9UI26 975 aaKnown RBP18.61■□□□□ 0.57
CLN6-212ENST00000636020 SLC25A13Q9UJS0 675 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 CACNA1DQ01668 2161 aa18.61■□□□□ 0.57
CLN6-212ENST00000636020 KPNA3O00505 521 aaPredicted RBP18.6■□□□□ 0.57
CLN6-212ENST00000636020 RAD51BO15315 384 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 SPINT1O43278 529 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 BNIP3LO60238 219 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 JMJD7P0C870 316 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 TACR2P21452 398 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 RABIFP47224 123 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 EIF2B5Q13144 721 aaKnown RBP18.6■□□□□ 0.57
CLN6-212ENST00000636020 KCNAB2Q13303 367 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 CXorf57Q6NSI4 855 aaKnown RBP18.6■□□□□ 0.57
CLN6-212ENST00000636020 BORAQ6PGQ7 559 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 CLEC4CQ8WTT0 213 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 SLC35F5Q8WV83 523 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 BTN2A2Q8WVV5 523 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 SLC17A9Q9BYT1 436 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 TMEM8AQ9HCN3 771 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 SPASTQ9UBP0 616 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 TUBD1Q9UJT1 453 aa18.6■□□□□ 0.57
CLN6-212ENST00000636020 PRAMEF33A0A0G2JMD5 474 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 D6RAR5 112 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 LMO7DNF2Z398 122 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 RNF103O00237 685 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 O00370 1275 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 PIK3R2O00459 728 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 PRAMEF10O60809 474 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 PAK4O96013 591 aaPredicted RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 PDIA4P13667 645 aaKnown RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 CCKBRP32239 447 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 CHRNA3P32297 505 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 NASPP49321 788 aaPredicted RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 RGS7P49802 495 aa18.59■□□□□ 0.57
CLN6-212ENST00000636020 ADKP55263 362 aaKnown RBP18.59■□□□□ 0.57
CLN6-212ENST00000636020 ENPEPQ07075 957 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms