RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 VPS28Q9UK41 221 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 TRPM6Q9BX84 2022 aa20.66■□□□□ 0.9
TARDBP-228ENST00000629725 KPNA3O00505 521 aaPredicted RBP20.65■□□□□ 0.9
TARDBP-228ENST00000629725 CTSLP07711 333 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 SLC2A3P11169 496 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 PRCPP42785 496 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 YWHAZP63104 245 aaKnown RBP20.65■□□□□ 0.9
TARDBP-228ENST00000629725 SKOR1P84550 965 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 EIF4EBP2Q13542 120 aaPredicted RBP20.65■□□□□ 0.9
TARDBP-228ENST00000629725 ANKRD40Q6AI12 368 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 FBXL22Q6P050 247 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 GCNT7Q6ZNI0 430 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 Q6ZSR6 202 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 ABI3BPQ7Z7G0 1075 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 DCP2Q8IU60 420 aaKnown RBP20.65■□□□□ 0.9
TARDBP-228ENST00000629725 OR52K2Q8NGK3 314 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 FAM174AQ8TBP5 190 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 ATXN7L3BQ96GX2 97 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 DYRK4Q9NR20 520 aa20.65■□□□□ 0.9
TARDBP-228ENST00000629725 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.64■□□□□ 0.89
TARDBP-228ENST00000629725 A6NNZ2 444 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 PCDH8O95206 1070 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 CCR1P32246 355 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 PITX1P78337 314 aaPredicted RBP20.64■□□□□ 0.89
TARDBP-228ENST00000629725 CENPCQ03188 943 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 ZNF177Q13360 481 aaPredicted RBP20.64■□□□□ 0.89
TARDBP-228ENST00000629725 CDKN3Q16667 212 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 KIF26BQ2KJY2 2108 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 ZCCHC8Q6NZY4 707 aaKnown RBP20.64■□□□□ 0.89
TARDBP-228ENST00000629725 CCDC81Q6ZN84 652 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 PTAR1Q7Z6K3 402 aaPredicted RBP20.64■□□□□ 0.89
TARDBP-228ENST00000629725 CCDC114Q96M63 670 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 MED15Q96RN5 788 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 NCKIPSDQ9NZQ3 722 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 ZFR2Q9UPR6 939 aaKnown RBP20.64■□□□□ 0.89
TARDBP-228ENST00000629725 PCDHGA8Q9Y5G5 932 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 OR51B4Q9Y5P0 310 aa20.64■□□□□ 0.89
TARDBP-228ENST00000629725 A0A1W2PNU3 283 aaPredicted RBP20.63■□□□□ 0.89
TARDBP-228ENST00000629725 E5RJQ4 531 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 ZNF202O95125 648 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 SRCP12931 536 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 KRT10P13645 584 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 CHRNA3P32297 505 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 RRAGAQ7L523 313 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 PRICKLE2Q7Z3G6 844 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 ZNF548Q8NEK5 533 aaPredicted RBP20.63■□□□□ 0.89
TARDBP-228ENST00000629725 TMIEQ8NEW7 156 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 STK32AQ8WU08 396 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 SNX21Q969T3 373 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 ARRDC3Q96B67 414 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 SLC4A5Q9BY07 1137 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 THAP9Q9H5L6 903 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 FAM204AQ9H8W3 233 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 METTL14Q9HCE5 456 aaKnown RBP20.63■□□□□ 0.89
TARDBP-228ENST00000629725 VANGL2Q9ULK5 521 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 HS3ST2Q9Y278 367 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 ENTPD2Q9Y5L3 495 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 HS3ST3A1Q9Y663 406 aa20.63■□□□□ 0.89
TARDBP-228ENST00000629725 SYNJ2BP-COX16A0A087WUM0 186 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 CPED1A4D0V7 1026 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 PMM2O15305 246 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 CSF2P04141 144 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 PMS1P54277 932 aaKnown RBP20.62■□□□□ 0.89
TARDBP-228ENST00000629725 KRT85P78386 507 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 CETN1Q12798 172 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 AUHQ13825 339 aaKnown RBP20.62■□□□□ 0.89
TARDBP-228ENST00000629725 SEL1L3Q68CR1 1132 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 OR6B2Q6IFH4 312 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 DENND1BQ6P3S1 775 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 GUSBP11Q6P575 273 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 FOXR1Q6PIV2 292 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 RBM44Q6ZP01 1051 aaKnown RBP20.62■□□□□ 0.89
TARDBP-228ENST00000629725 TMEM110Q86TL2 294 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 ARL14Q8N4G2 192 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 ATP11CQ8NB49 1132 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 OR2A12Q8NGT7 310 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 TPCN2Q8NHX9 752 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 PRR11Q96HE9 360 aaPredicted RBP20.62■□□□□ 0.89
TARDBP-228ENST00000629725 CCDC34Q96HJ3 373 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 MUC3BQ9H195 1237 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 RMND1Q9NWS8 449 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 DDIT4Q9NX09 232 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 COX16Q9P0S2 106 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 RP1P56715 2156 aa20.62■□□□□ 0.89
TARDBP-228ENST00000629725 CDRT15L2A8MXV6 281 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 H3BM21 787 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 RIOK3O14730 519 aaKnown RBP20.61■□□□□ 0.89
TARDBP-228ENST00000629725 CLDN11O75508 207 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 MT-CO1P00395 513 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 PRNPP04156 253 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 IRAK1P51617 712 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 KRT83P78385 493 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 CDK17Q00537 523 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 GCNT1Q02742 428 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 LRRC63Q05C16 580 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 FZD2Q14332 565 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 TMEM259Q4ZIN3 620 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 COBLL1Q53SF7 1204 aa20.61■□□□□ 0.89
TARDBP-228ENST00000629725 ZNF658Q5TYW1 1059 aaPredicted RBP20.61■□□□□ 0.89
TARDBP-228ENST00000629725 ERN2Q76MJ5 926 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms