RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 C5orf22Q49AR2 442 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 EARS2Q5JPH6 523 aaKnown RBP4.43□□□□□ -1.7
CDR1-202ENST00000625883 STRIP1Q5VSL9 837 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 HAUS3Q68CZ6 603 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 KCNG4Q8TDN1 519 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 NR1H4Q96RI1 486 aaPredicted RBP4.43□□□□□ -1.7
CDR1-202ENST00000625883 CHCHD6Q9BRQ6 235 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.43□□□□□ -1.7
CDR1-202ENST00000625883 CXorf56Q9H5V9 222 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 RIOX1Q9H6W3 641 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 VEZTQ9HBM0 779 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 TERF2IPQ9NYB0 399 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 KLHL13Q9P2N7 655 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 CLDN16Q9Y5I7 305 aa4.43□□□□□ -1.7
CDR1-202ENST00000625883 C17orf113A0A1B0GUU1 675 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 PABPN1LA6NDY0 278 aaKnown RBP4.42□□□□□ -1.7
CDR1-202ENST00000625883 TMEM247A6NEH6 219 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 HMGB1P1B2RPK0 211 aaPredicted RBP4.42□□□□□ -1.7
CDR1-202ENST00000625883 LDLRAD4O15165 306 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 STRNO43815 780 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 CEP104O60308 925 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 PPFIA2O75334 1257 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 NEURL1O76050 574 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 NFATC1O95644 943 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 PRKCGP05129 697 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 CYP2J2P51589 502 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 SLC12A2P55011 1212 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 HSF1Q00613 529 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 TBCEQ15813 527 aaPredicted RBP4.42□□□□□ -1.7
CDR1-202ENST00000625883 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 SLC9B1Q4ZJI4 515 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 CEP78Q5JTW2 689 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 MZT2BQ6NZ67 158 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 LRIG3Q6UXM1 1119 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 TMTC3Q6ZXV5 915 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 METTL6Q8TCB7 284 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 BCAS4Q8TDM0 211 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 HSPH1Q92598 858 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 TAS2R10Q9NYW0 307 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 KCND2Q9NZV8 630 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 PEMTQ9UBM1 199 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 SLC8A2Q9UPR5 921 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 WDR17Q8IZU2 1322 aa4.42□□□□□ -1.7
CDR1-202ENST00000625883 A0A1W2PQM1 296 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 NPIPB15A6NHN6 443 aaPredicted RBP4.41□□□□□ -1.7
CDR1-202ENST00000625883 TGFB1I1O43294 461 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 CBX6O95503 412 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 NUDT3O95989 172 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 UBL4AP11441 157 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 BMP5P22003 454 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 CHRNA5P30532 468 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 EFNA5P52803 228 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 SLC10A2Q12908 348 aaPredicted RBP4.41□□□□□ -1.7
CDR1-202ENST00000625883 ERV3-1Q14264 604 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 SMN1Q16637 294 aaKnown RBP4.41□□□□□ -1.7
CDR1-202ENST00000625883 SLC45A4Q5BKX6 768 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 PAPD7Q5XG87 772 aaKnown RBP4.41□□□□□ -1.7
CDR1-202ENST00000625883 TBC1D9BQ66K14 1250 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 ATF7IPQ6VMQ6 1270 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 NEK10Q6ZWH5 1172 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 RD3Q7Z3Z2 195 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 DIS3L2Q8IYB7 885 aaKnown RBP4.41□□□□□ -1.7
CDR1-202ENST00000625883 GHDCQ8N2G8 530 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 GALNT16Q8N428 558 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 CPXM2Q8N436 756 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 TDRD9Q8NDG6 1382 aaKnown RBP4.41□□□□□ -1.7
CDR1-202ENST00000625883 HDAC7Q8WUI4 952 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 KIF1BPQ96EK5 621 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 SCNM1Q9BWG6 230 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 BRF2Q9HAW0 419 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 ATP8A2Q9NTI2 1148 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 TBC1D22BQ9NU19 505 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 GRHL1Q9NZI5 618 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 HSPB7Q9UBY9 170 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 IPO11Q9UI26 975 aaKnown RBP4.41□□□□□ -1.7
CDR1-202ENST00000625883 DHDHQ9UQ10 334 aa4.41□□□□□ -1.7
CDR1-202ENST00000625883 MST1RQ04912 1400 aa4.4□□□□□ -1.7
CDR1-202ENST00000625883 USP12O75317 370 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 RNASEH2AO75792 299 aaKnown RBP4.4□□□□□ -1.71
CDR1-202ENST00000625883 SERPINC1P01008 464 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 TUBB4AP04350 444 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 CLEC3BP05452 202 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 COX7A2P14406 83 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 KLRC2P26717 231 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 ICAM3P32942 547 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 SKIV2L2P42285 1042 aaKnown RBP4.4□□□□□ -1.71
CDR1-202ENST00000625883 POLD2P49005 469 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 FOXF2Q12947 444 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 PKP1Q13835 747 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 ME3Q16798 604 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 SNX30Q5VWJ9 437 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 TMEM81Q6P7N7 255 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 C4orf50Q6ZRC1 276 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 CYB5R4Q7L1T6 521 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 PTF1AQ7RTS3 328 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 UBE2Q1Q7Z7E8 422 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 TRIM74Q86UV6 250 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 TRIM73Q86UV7 250 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 CCDC25Q86WR0 208 aa4.4□□□□□ -1.71
CDR1-202ENST00000625883 PRIMA1Q86XR5 153 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms