RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TM7SF2O76062 418 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 PSMG1O95456 288 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 ASGR1P07306 291 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 F7P08709 466 aaPredicted RBP8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 MYL4P12829 197 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 TYMPP19971 482 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 YY1P25490 414 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 ARRB2P32121 409 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 GCKP35557 465 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 GRIK1P39086 918 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 ABCG1P45844 678 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 SLC5A3P53794 718 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 MXRA7P84157 204 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 IRF9Q00978 393 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 RCN1Q15293 331 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 DLG2Q15700 870 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 CCDC6Q16204 474 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 ANO4Q32M45 955 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 PCID2Q5JVF3 399 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 MANEALQ5VSG8 457 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 ATG14Q6ZNE5 492 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 MAVSQ7Z434 540 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 SCUBE1Q8IWY4 988 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 GPATCH11Q8N954 259 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 SPATA22Q8NHS9 363 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 STMN2Q93045 179 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 NAF1Q96HR8 494 aaKnown RBP8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 FAM161BQ96MY7 647 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 IL12RB2Q99665 862 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 TBL1YQ9BQ87 522 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 CXorf56Q9H5V9 222 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 NMRAL1Q9HBL8 299 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 GLOD4Q9HC38 313 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 BATF3Q9NR55 127 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 CDY1Q9Y6F8 540 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 BPTFQ12830 3046 aa8.46□□□□□ -1.05
SND1-IT1-201ENST00000623342 NUP205Q92621 2012 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 GOLGA8TH3BQL2 631 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 ZNF195O14628 629 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 TNFRSF10BO14763 440 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 MATN3O15232 486 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 MAFKO60675 156 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 SIN3BO75182 1162 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 KRT36O76013 467 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 ITGB1P05556 798 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 APOA4P06727 396 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 PPP2R5DQ14738 602 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 C6orf163Q5TEZ5 329 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 PKN3Q6P5Z2 889 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 NET1Q7Z628 596 aaPredicted RBP8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 CASP10Q92851 521 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 FCRL2Q96LA5 508 aaPredicted RBP8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 PPP1R2P1Q96PQ5 205 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 GPR22Q99680 433 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 SLC39A8Q9C0K1 460 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 RHOJQ9H4E5 214 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 SFMBT1Q9UHJ3 866 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 MID2Q9UJV3 735 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 TLK1Q9UKI8 766 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 SLC39A10Q9ULF5 831 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 ANKRD6Q9Y2G4 727 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 PATJQ8NI35 1801 aa8.46□□□□□ -1.06
SND1-IT1-201ENST00000623342 EYSQ5T1H1 3165 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 F8W8V4 182 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 MSI1O43347 362 aaKnown RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 TRIM13O60858 407 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 CIB2O75838 187 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 LUC7L3O95232 432 aaKnown RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 HSPA4LO95757 839 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 MT-CYBP00156 380 aaPredicted RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 SLC10A3P09131 477 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 CSRP3P50461 194 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 GEMP55040 296 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 FCGRTP55899 365 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 YWHAHQ04917 246 aaPredicted RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 SLC34A1Q06495 639 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 TRIM32Q13049 653 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 THOC5Q13769 683 aaKnown RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 GRM3Q14832 879 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 NAA25Q14CX7 972 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 KCNA10Q16322 511 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 CMPK2Q5EBM0 449 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 TIGD7Q6NT04 549 aaPredicted RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 RAPH1Q70E73 1250 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 SCD5Q86SK9 330 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 ZC3HC1Q86WB0 502 aaKnown RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 CCDC117Q8IWD4 279 aaPredicted RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 ULK2Q8IYT8 1036 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 ACVR1CQ8NER5 493 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 PPHLN1Q8NEY8 458 aaKnown RBP8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 IPMKQ8NFU5 416 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 RDH11Q8TC12 318 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 TSNARE1Q96NA8 513 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 THTPAQ9BU02 230 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 CDH19Q9H159 772 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 PCDHB8Q9UN66 801 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 GABRQQ9UN88 632 aa8.45□□□□□ -1.06
SND1-IT1-201ENST00000623342 NLRC5Q86WI3 1866 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms