RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 ULK2Q8IYT8 1036 aa12.18□□□□□ -0.46
TP53-227ENST00000622645 ATPAF2Q8N5M1 289 aa12.18□□□□□ -0.46
TP53-227ENST00000622645 STMN2Q93045 179 aa12.18□□□□□ -0.46
TP53-227ENST00000622645 FCRL2Q96LA5 508 aaPredicted RBP12.18□□□□□ -0.46
TP53-227ENST00000622645 SLC39A8Q9C0K1 460 aa12.18□□□□□ -0.46
TP53-227ENST00000622645 ARHGEF38Q9NXL2 777 aa12.18□□□□□ -0.46
TP53-227ENST00000622645 STOML1Q9UBI4 398 aa12.18□□□□□ -0.46
TP53-227ENST00000622645 SLC7A8Q9UHI5 535 aa12.18□□□□□ -0.46
TP53-227ENST00000622645 TTC3P53804 2025 aa12.18□□□□□ -0.46
TP53-227ENST00000622645 MAFKO60675 156 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 TM7SF2O76062 418 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 MPOP05164 745 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 ATP5BP06576 529 aaKnown RBP12.17□□□□□ -0.46
TP53-227ENST00000622645 CPOXP36551 454 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 AVPR1AP37288 418 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 ABL2P42684 1182 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 CDK7P50613 346 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 TBCCQ15814 346 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 KIFC1Q9BW19 673 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 ATXN3LQ9H3M9 355 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 SPC25Q9HBM1 224 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 ZFYVE28Q9HCC9 887 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 NMRK1Q9NWW6 199 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 MPP6Q9NZW5 540 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 SUFUQ9UMX1 484 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 PCDHB12Q9Y5F1 795 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 WASF2Q9Y6W5 498 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 BPTFQ12830 3046 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 TK2O00142 265 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 CACNG3O60359 315 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 B4GALT3O60512 393 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 VAPBO95292 243 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 HSPA4LO95757 839 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 AHSGP02765 367 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 NCF2P19878 526 aaPredicted RBP12.17□□□□□ -0.46
TP53-227ENST00000622645 CCNCP24863 283 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 CCR1P32246 355 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 GLRBP48167 497 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 CSE1LP55060 971 aaKnown RBP12.17□□□□□ -0.46
TP53-227ENST00000622645 COG7P83436 770 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 GRIK3Q13003 919 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 CTBP1Q13363 440 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 DSC3Q14574 896 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 SDHAF4Q5VUM1 108 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 RIPOR1Q6ZS17 1223 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 SCD5Q86SK9 330 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 ZC3HC1Q86WB0 502 aaKnown RBP12.17□□□□□ -0.46
TP53-227ENST00000622645 DENND6AQ8IWF6 608 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 TSGA13Q96PP4 275 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 PANX3Q96QZ0 392 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 STN1Q9H668 368 aaKnown RBP12.17□□□□□ -0.46
TP53-227ENST00000622645 COG4Q9H9E3 785 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 NMUR1Q9HB89 426 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 ABCC13Q9NSE7 274 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 DNAJC28Q9NX36 388 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 SORCS3Q9UPU3 1222 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 HTTP42858 3142 aa12.17□□□□□ -0.46
TP53-227ENST00000622645 LOC100653049A0A140TA62 436 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 TRIM13O60858 407 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 PMPCBO75439 489 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 KRT34O76011 436 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 TUBP50607 506 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 RAB27AP51159 221 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 TSPY1Q01534 308 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 SLC34A1Q06495 639 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 USP10Q14694 798 aaKnown RBP12.16□□□□□ -0.46
TP53-227ENST00000622645 KCNA10Q16322 511 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 DNAL1Q4LDG9 190 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 ARTNQ5T4W7 220 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 PDPK2PQ6A1A2 396 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 DENND5AQ6IQ26 1287 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 ESRP1Q6NXG1 681 aaKnown RBP12.16□□□□□ -0.46
TP53-227ENST00000622645 LINC00523Q86TU6 105 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 SPATA2LQ8IUW3 424 aaPredicted RBP12.16□□□□□ -0.46
TP53-227ENST00000622645 SCN4BQ8IWT1 228 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 THEM5Q8N1Q8 247 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 PHTF2Q8N3S3 785 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 SLC25A41Q8N5S1 370 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 MAPK15Q8TD08 544 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 DNAJC9Q8WXX5 260 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 HAPLN3Q96S86 360 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 TBL1YQ9BQ87 522 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 FICDQ9BVA6 458 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 GATA5Q9BWX5 397 aaPredicted RBP12.16□□□□□ -0.46
TP53-227ENST00000622645 FTHL17Q9BXU8 183 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 TASP1Q9H6P5 420 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 TRMT13Q9NUP7 481 aaKnown RBP12.16□□□□□ -0.46
TP53-227ENST00000622645 DSEQ9UL01 958 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 AAR2Q9Y312 384 aaKnown RBP12.16□□□□□ -0.46
TP53-227ENST00000622645 TNFRSF10BO14763 440 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 ADAMTS4O75173 837 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 KLHL2O95198 593 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 CHRNGP07510 517 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 ALOX15P16050 662 aaPredicted RBP12.16□□□□□ -0.46
TP53-227ENST00000622645 CCR10P46092 362 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 MPP1Q00013 466 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 PEX6Q13608 980 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 ZNF460Q14592 562 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 MUM1Q2TAK8 710 aa12.16□□□□□ -0.46
TP53-227ENST00000622645 ANO4Q32M45 955 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms