RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SHROOM3Q8TF72 1996 aa9.79□□□□□ -0.84
IGHV3-54-201ENST00000622166 MYBPHLA2RUH7 354 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 EIF4E1BA6NMX2 242 aaKnown RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 MATN2O00339 956 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 HDAC3O15379 428 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 GRID2O43424 1007 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 ATP9BO43861 1147 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 LRIG2O94898 1065 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 SNUPNO95149 360 aaKnown RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 BAG2O95816 211 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 JCHAINP01591 159 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 IGLV3-25P01717 112 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 LYNP07948 512 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 MYL3P08590 195 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 USP17L7P0C7H9 530 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 SRGAP2BP0DMP2 458 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 GNAT1P11488 350 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 NCAM1P13591 858 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PAX3P23760 479 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 IGFBP6P24592 240 aaPredicted RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PIK3R1P27986 724 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 NMBRP28336 390 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 HOXC13P31276 330 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 RPL9P32969 192 aaKnown RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 CPT1AP50416 773 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 CCNHP51946 323 aaPredicted RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 ASPHQ12797 758 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 USP4Q13107 963 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PRKAA1Q13131 559 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 MAP2K5Q13163 448 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 EIF4EBP2Q13542 120 aaPredicted RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 CUL3Q13618 768 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 SLC12A1Q13621 1099 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 DLG2Q15700 870 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 UGP2Q16851 508 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PRAMEF19Q5SWL8 479 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 VWA5B1Q5TIE3 1220 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 LIPMQ5VYY2 423 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 OLFML2BQ68BL8 750 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 TWF2Q6IBS0 349 aaKnown RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PKN3Q6P5Z2 889 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 RNF111Q6ZNA4 994 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 FRMD7Q6ZUT3 714 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 TLK2Q86UE8 772 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 CNTD1Q8N815 330 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 SHKBP1Q8TBC3 707 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PDCD6IPQ8WUM4 868 aaKnown RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PTCD2Q8WV60 388 aaKnown RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 SMARCD1Q96GM5 515 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PCED1BQ96HM7 432 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 TSNARE1Q96NA8 513 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PGLYRP2Q96PD5 576 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PPP1R2P1Q96PQ5 205 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 FCRL5Q96RD9 977 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 TTC1Q99614 292 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 IL12RB2Q99665 862 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 TRIM62Q9BVG3 475 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 KATNAL1Q9BW62 490 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 OXCT2Q9BYC2 517 aaPredicted RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 ACE2Q9BYF1 805 aaPredicted RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 PPP1R12CQ9BZL4 782 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 YIPF3Q9GZM5 350 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 FAM192AQ9GZU8 254 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 WDCPQ9H6R7 721 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 CAB39LQ9H9S4 337 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 TCF7L2Q9NQB0 619 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 CHRAC1Q9NRG0 131 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 SPATS2LQ9NUQ6 558 aaKnown RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 TMEM30AQ9NV96 361 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 ARHGEF38Q9NXL2 777 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 OR12D3Q9UGF7 316 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 TLK1Q9UKI8 766 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 POMPQ9Y244 141 aa9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 AAR2Q9Y312 384 aaKnown RBP9.78□□□□□ -0.84
IGHV3-54-201ENST00000622166 RGSL1A5PLK6 1076 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 H3BNX3 289 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 DCXO43602 365 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 NPHS1O60500 1241 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 ANXA9O76027 345 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 DDHD2O94830 711 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TPH1P17752 444 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 MPSTP25325 297 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 PCSK1P29120 753 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 ADRA1AP35348 466 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 RPL14P50914 215 aaKnown RBP9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 CLCN2P51788 898 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 EPHB1P54762 984 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 GEMP55040 296 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 MRPS6P82932 125 aaKnown RBP9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 NSUN2Q08J23 767 aaKnown RBP eCLIP9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TBL3Q12788 808 aaKnown RBP9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 BRMS1LQ5PSV4 323 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 MAP3K21Q5TCX8 1036 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 MANEALQ5VSG8 457 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 TAF2Q6P1X5 1199 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 FAM171BQ6P995 826 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 C16orf89Q6UX73 402 aa9.77□□□□□ -0.85
IGHV3-54-201ENST00000622166 ACAD11Q709F0 780 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms