RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PPHLN1Q8NEY8 458 aaKnown RBP12.31□□□□□ -0.44
SRRT-216ENST00000618262 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.31□□□□□ -0.44
SRRT-216ENST00000618262 C11orf70Q9BRQ4 267 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 IGFLR1Q9H665 355 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 SPG21Q9NZD8 308 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 SELENONQ9NZV5 590 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 LUZP4Q9P127 313 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 TAGLN3Q9UI15 199 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 SPEF1Q9Y4P9 236 aa12.31□□□□□ -0.44
SRRT-216ENST00000618262 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 GOLGA8SH3BPF8 625 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 ST8SIA5O15466 376 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 LCP1P13796 627 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 PTPN1P18031 435 aaKnown RBP12.3□□□□□ -0.44
SRRT-216ENST00000618262 CALB2P22676 271 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 L1CAMP32004 1257 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 TRIM14Q14142 442 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 ERAP2Q6P179 960 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.3□□□□□ -0.44
SRRT-216ENST00000618262 RAPGEF5Q92565 580 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 SLC9A7Q96T83 725 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 AGPAT1Q99943 283 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 NUP85Q9BW27 656 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 CRISPLD1Q9H336 500 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 GHITMQ9H3K2 345 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 ARNT2Q9HBZ2 717 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 PTTG2Q9NZH5 202 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 CYTH4Q9UIA0 394 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 HYOU1Q9Y4L1 999 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 PTPRSQ13332 1948 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 FNDC1Q4ZHG4 1894 aaPredicted RBP12.3□□□□□ -0.44
SRRT-216ENST00000618262 PRRT4C9JH25 899 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 PI4K2BG5E9Z4 385 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 BUB1O43683 1085 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 EFCAB14O75071 495 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 TCEA3O75764 348 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 LINC00271P0C7V0 271 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 CD86P42081 329 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 MSH2P43246 934 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 PCYT1AP49585 367 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 FMO1Q01740 532 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 ROR1Q01973 937 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 DUSP4Q13115 394 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 RNF19BQ6ZMZ0 732 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 TDHQ8IZJ6 230 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 SLC39A11Q8N1S5 342 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 ARHGAP24Q8N264 748 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 CLEC4CQ8WTT0 213 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 GAB3Q8WWW8 586 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 NCLNQ969V3 563 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 HSPBAP1Q96EW2 488 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 SUSD3Q96L08 255 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 GDAP2Q9NXN4 497 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 CDH22Q9UJ99 828 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 NOCTQ9UK39 431 aaKnown RBP12.3□□□□□ -0.44
SRRT-216ENST00000618262 MAGED2Q9UNF1 606 aaPredicted RBP12.3□□□□□ -0.44
SRRT-216ENST00000618262 A0A1W2PQJ5 194 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 GUCA1CO95843 209 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 SERPING1P05155 500 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 ALOX5P09917 674 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 RFX1P22670 979 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 VPS41P49754 854 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 EIF2B2P49770 351 aaKnown RBP12.3□□□□□ -0.44
SRRT-216ENST00000618262 NDUFV1P49821 464 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 RAB15P59190 212 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 TAP1Q03518 808 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 KPNB1Q14974 876 aaKnown RBP12.3□□□□□ -0.44
SRRT-216ENST00000618262 ZNF124Q15973 351 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 KCTD19Q17RG1 926 aaPredicted RBP12.3□□□□□ -0.44
SRRT-216ENST00000618262 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 C4orf22Q6V702 233 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 STK32CQ86UX6 486 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 CCNYL1Q8N7R7 359 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 PSD4Q8NDX1 1056 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 IPMKQ8NFU5 416 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 TTLQ8NG68 377 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 EFHD2Q96C19 240 aaPredicted RBP12.3□□□□□ -0.44
SRRT-216ENST00000618262 EDEM3Q9BZQ6 932 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 IFT22Q9H7X7 185 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 RNPEPL1Q9HAU8 725 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 FAM114A2Q9NRY5 505 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 NUDT5Q9UKK9 219 aa12.3□□□□□ -0.44
SRRT-216ENST00000618262 A0A088AWK7 358 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 TYW5A2RUC4 315 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 HNRNPCL2B2RXH8 293 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 HGSO14964 777 aaPredicted RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 MICAL2O94851 1124 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 POP4O95707 220 aaKnown RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 CXCL14O95715 111 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 HTRA4P83105 476 aaPredicted RBP12.29□□□□□ -0.44
SRRT-216ENST00000618262 LLGL1Q15334 1064 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 TAF5Q15542 800 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 SGO2Q562F6 1265 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 FIGNQ5HY92 759 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 HID1Q8IV36 788 aa12.29□□□□□ -0.44
SRRT-216ENST00000618262 SCUBE3Q8IX30 993 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms