RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 HS3ST2Q9Y278 367 aa17.54■□□□□ 0.4
SBDS-205ENST00000617799 PCDHGA2Q9Y5H1 932 aa17.54■□□□□ 0.4
SBDS-205ENST00000617799 CAPN6Q9Y6Q1 641 aa17.54■□□□□ 0.4
SBDS-205ENST00000617799 R4GN57 208 aa17.54■□□□□ 0.4
SBDS-205ENST00000617799 MUC6Q6W4X9 2439 aa17.54■□□□□ 0.4
SBDS-205ENST00000617799 ARHGAP42A6NI28 874 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 KIF2AO00139 706 aaPredicted RBP17.53■□□□□ 0.4
SBDS-205ENST00000617799 KDELR3O43731 214 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 SIN3BO75182 1162 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 ZRANB2O95218 330 aaKnown RBP eCLIP17.53■□□□□ 0.4
SBDS-205ENST00000617799 MT-CO1P00395 513 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 SRCP12931 536 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 NDUFV2P19404 249 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 KDELR1P24390 212 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 SERPINB6P35237 376 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 ARSEP51690 589 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 RWDD2BP57060 319 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 ARF5P84085 180 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 CAMK2GQ13555 558 aaPredicted RBP17.53■□□□□ 0.4
SBDS-205ENST00000617799 DLG2Q15700 870 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 ANKRD20A8PQ5CZ79 823 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 WDR5BQ86VZ2 330 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 LZTR1Q8N653 840 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 NPWQ8N729 165 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 NETO2Q8NC67 525 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 OR2T3Q8NH03 318 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 EXD1Q8NHP7 514 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.53■□□□□ 0.4
SBDS-205ENST00000617799 RAPGEF5Q92565 580 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 RNF25Q96BH1 459 aaPredicted RBP17.53■□□□□ 0.4
SBDS-205ENST00000617799 CCDC114Q96M63 670 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 SLC39A8Q9C0K1 460 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 LRRC19Q9H756 370 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 PRSS16Q9NQE7 514 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 MFHAS1Q9Y4C4 1052 aa17.53■□□□□ 0.4
SBDS-205ENST00000617799 CKAP5Q14008 2032 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 WDFY4Q6ZS81 3184 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 CCDC163A0A0D9SF12 145 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 TARSL2A2RTX5 802 aaKnown RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 ZSCAN5CA6NGD5 496 aaPredicted RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 K7ERQ8 282 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 DCLK1O15075 740 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 ATP9BO43861 1147 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 RNASEH1O60930 286 aaKnown RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 ZMPSTE24O75844 475 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 VAV1P15498 845 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 ZFXP17010 805 aaPredicted RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 RECQLP46063 649 aaPredicted RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 SERPINH1P50454 418 aaKnown RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 CLCN6P51797 869 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 SLC20A2Q08357 652 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 SERINC3Q13530 473 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 RPS6KA1Q15418 735 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 USP39Q53GS9 565 aaKnown RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 Q6ZVU0 165 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 RASSF3Q86WH2 238 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 TMPRSS6Q8IU80 811 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 CCDC50Q8IVM0 306 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 PRCCQ92733 491 aaPredicted RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 HES6Q96HZ4 224 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 MRGPRX1Q96LB2 322 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 MAK16Q9BXY0 300 aaKnown RBP17.52■□□□□ 0.4
SBDS-205ENST00000617799 FBRSQ9HAH7 460 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 SP110Q9HB58 689 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 ETNK2Q9NVF9 386 aa17.52■□□□□ 0.4
SBDS-205ENST00000617799 ZNF189O75820 626 aaPredicted RBP17.51■□□□□ 0.39
SBDS-205ENST00000617799 ACADMP11310 421 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 IL4RP24394 825 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 VASPP50552 380 aaPredicted RBP17.51■□□□□ 0.39
SBDS-205ENST00000617799 PAPOLAP51003 745 aaKnown RBP17.51■□□□□ 0.39
SBDS-205ENST00000617799 DNA2P51530 1060 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 C9orf64Q5T6V5 341 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 MEI1Q5TIA1 1274 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 C22orf39Q6P5X5 142 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 CEP68Q76N32 757 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 STK40Q8N2I9 435 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 ZBTB44Q8NCP5 570 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 PCDH19Q8TAB3 1148 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 FRS2Q8WU20 508 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 NELL1Q92832 810 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 SIPA1Q96FS4 1042 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 SPACA7Q96KW9 195 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 MKRN2Q9H000 416 aaKnown RBP17.51■□□□□ 0.39
SBDS-205ENST00000617799 KLC2Q9H0B6 622 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 TNKS2Q9H2K2 1166 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 CD248Q9HCU0 757 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 NYNRINQ9P2P1 1898 aaKnown RBP17.51■□□□□ 0.39
SBDS-205ENST00000617799 INVSQ9Y283 1065 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 FCF1Q9Y324 198 aaKnown RBP17.51■□□□□ 0.39
SBDS-205ENST00000617799 FARP1Q9Y4F1 1045 aaPredicted RBP17.51■□□□□ 0.39
SBDS-205ENST00000617799 ACTL7AQ9Y615 435 aa17.51■□□□□ 0.39
SBDS-205ENST00000617799 CHD5Q8TDI0 1954 aa17.5■□□□□ 0.39
SBDS-205ENST00000617799 CXorf51AA0A1B0GTR3 108 aa17.5■□□□□ 0.39
SBDS-205ENST00000617799 SMAD6O43541 496 aaKnown RBP17.5■□□□□ 0.39
SBDS-205ENST00000617799 RPP40O75818 363 aaKnown RBP17.5■□□□□ 0.39
SBDS-205ENST00000617799 FTCDO95954 541 aa17.5■□□□□ 0.39
SBDS-205ENST00000617799 PTPN7P35236 360 aa17.5■□□□□ 0.39
SBDS-205ENST00000617799 MARCKSL1P49006 195 aa17.5■□□□□ 0.39
SBDS-205ENST00000617799 COPAP53621 1224 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms