RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 RPL26P61254 145 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 OCA2Q04671 838 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 PTPN11Q06124 597 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 PMS2P3Q13401 168 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ZNF460Q14592 562 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ZNF829Q3KNS6 432 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 ZBED5Q49AG3 693 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 NANOGP8Q6NSW7 305 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 KCTD8Q6ZWB6 473 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 CHSY3Q70JA7 882 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 GPR180Q86V85 440 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 FAM131BQ86XD5 332 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 DHFR2Q86XF0 187 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 CHERPQ8IWX8 916 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 SLC15A4Q8N697 577 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 RNF149Q8NC42 400 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ZC3H15Q8WU90 426 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 KCTD4Q8WVF5 259 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 RSPH1Q8WYR4 309 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 LRRC39Q96DD0 335 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 TWNKQ96RR1 684 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 SEPHS2Q99611 448 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 B3GNT5Q9BYG0 378 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 JPH1Q9HDC5 661 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 SLC38A7Q9NVC3 462 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 UBIAD1Q9Y5Z9 338 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 COL22A1Q8NFW1 1626 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 SOCS2O14508 198 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 MRASO14807 208 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 MAN1A2O60476 641 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ESRRBO95718 433 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 GSRP00390 522 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ITGB3P05106 788 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ARL4AP40617 200 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 RAD23AP54725 363 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 SLC12A2P55011 1212 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 BTG3Q14201 252 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 TRIM25Q14258 630 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 FASTKQ14296 549 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 FUT11Q495W5 492 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 BOLA3Q53S33 107 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 HABP4Q5JVS0 413 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 FAM219BQ5XKK7 198 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 FSTL4Q6MZW2 842 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ELMSAN1Q6PJG2 1045 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 FAM183BPQ6ZVS7 135 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 KIAA2013Q8IYS2 634 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 OR9I1Q8NGQ6 314 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 FAM110BQ8TC76 370 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 URGCPQ8TCY9 931 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 IRGQQ8WZA9 623 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 CERS2Q96G23 380 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ACO2Q99798 780 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 HERC2P3Q9BVR0 1158 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 HIPK3Q9H422 1215 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 VPS45Q9NRW7 570 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 RNF19AQ9NV58 838 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 BFARQ9NZS9 450 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ARHGAP28Q9P2N2 729 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 FEM1BQ9UK73 627 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 USP21Q9UK80 565 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 GINS2Q9Y248 185 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ATP11BQ9Y2G3 1177 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 COPG1Q9Y678 874 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 SQORQ9Y6N5 450 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 SCN7AQ01118 1682 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 NEMP2A6NFY4 417 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 RNF103O00237 685 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 INPP4BO15327 924 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 CNOT3O75175 753 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 ICAM1P05362 532 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 NCAM1P13591 858 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 LCP1P13796 627 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 CCNA2P20248 432 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 IL10P22301 178 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 JAK1P23458 1154 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ARL1P40616 181 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 HARS2P49590 506 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 ZNF143P52747 638 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 TGFB2P61812 414 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 CCDC153Q494R4 210 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ASTLQ6HA08 431 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 PRR23BQ6ZRT6 265 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 SP8Q8IXZ3 490 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 SLC15A3Q8IY34 581 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 RYBPQ8N488 228 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 NIPA2Q8N8Q9 360 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 TMEM102Q8N9M5 508 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 ACMSDQ8TDX5 336 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 SLC39A7Q92504 469 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 APBB2Q92870 758 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 PHF21BQ96EK2 531 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 MFSD3Q96ES6 412 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 TMEM39BQ9GZU3 492 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 VPS33BQ9H267 617 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 SLC38A10Q9HBR0 1119 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 GGA3Q9NZ52 723 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 PKD2L2Q9NZM6 624 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 CNOT6Q9ULM6 557 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms