RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 SMTNL2Q2TAL5 461 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 C6orf10Q5SRN2 563 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 CFAP58Q5T655 872 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 GFI1BQ5VTD9 330 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 RETSATQ6NUM9 610 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 C16orf54Q6UWD8 224 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 B4GALNT4Q76KP1 1039 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 ADHFE1Q8IWW8 467 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 NRSN1Q8IZ57 195 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 OR4N4Q8N0Y3 316 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 MYCT1Q8N699 235 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 MSANTD4Q8NCY6 345 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 LPAR1Q92633 364 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 RSC1A1Q92681 617 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 SLC25A28Q96A46 364 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 SGCZQ96LD1 299 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 RMDN3Q96TC7 470 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 XPO4Q9C0E2 1151 aaKnown RBP2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 LMAN2LQ9H0V9 348 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 CHMP4BQ9H444 224 aaKnown RBP2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 PRKRIP1Q9H875 184 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 SFXN1Q9H9B4 322 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 DBNDD1Q9H9R9 158 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 NSMCE4AQ9NXX6 385 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 GJD2Q9UKL4 321 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 B3GNT3Q9Y2A9 372 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TMEM98Q9Y2Y6 226 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 PCDHGB3Q9Y5G1 929 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TRIP12Q14669 1992 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 SYNDIG1LA6NDD5 238 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 TRIM64A6NGJ6 449 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 TRIM64BA6NI03 449 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 RRN3P2A6NIE6 340 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 RHODO00212 210 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 MPHOSPH10O00566 681 aaKnown RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 IRAK2O43187 625 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 ATG13O75143 517 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 TIPRLO75663 272 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 GFPT2O94808 682 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 LARGE1O95461 756 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 DDX58O95786 925 aaKnown RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 WNT1P04628 370 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 CYP3A4P08684 503 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 XBP1P17861 261 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 CASQ1P31415 396 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 ATP6V1E1P36543 226 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 STAT1P42224 750 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 POLD2P49005 469 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 CDK7P50613 346 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 SLC37A1P57057 533 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 MPP1Q00013 466 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 ICA1Q05084 483 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 CALD1Q05682 793 aaKnown RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 BLMHQ13867 455 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 PTGR1Q14914 329 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 KIAA1755Q5JYT7 1200 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 PIK3CD-AS1Q5SR53 167 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 BTN2A1Q7KYR7 527 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 CYB5R4Q7L1T6 521 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 GALNT5Q7Z7M9 940 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 PELI3Q8N2H9 469 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 TEX9Q8N6V9 391 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 LSMEM1Q8N8F7 131 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 KIAA1191Q96A73 305 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 TMEM41AQ96HV5 264 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 REXO5Q96IC2 774 aaKnown RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 THOC3Q96J01 351 aaKnown RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 SPATA17Q96L03 361 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 ZSCAN31Q96LW9 406 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 TP63Q9H3D4 680 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 ZWILCHQ9H900 591 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 MRPL44Q9H9J2 332 aaKnown RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 MLXIPQ9HAP2 919 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 PLEKHA5Q9HAU0 1116 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 SMYD2Q9NRG4 433 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 IRAK4Q9NWZ3 460 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 EPS15L1Q9UBC2 864 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 CFDP1Q9UEE9 299 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 MAGED2Q9UNF1 606 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 COG5Q9UP83 839 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 ZBTB1Q9Y2K1 713 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 CRYL1Q9Y2S2 319 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 PCDHGB2Q9Y5G2 931 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 IKBKGQ9Y6K9 419 aa2.84□□□□□ -1.95
HMGB1P24-202ENST00000615653 KAT6BQ8WYB5 2073 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 TMEM272A0A1B0GTI8 110 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 FSD2A1L4K1 749 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 GOLGA6L3A6NEY3 463 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 MBD3L5A6NJ08 208 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 CHL1O00533 1208 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 MDM4O15151 490 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 DKC1O60832 514 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 ZBED4O75132 1171 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 CER1O95813 267 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 IFNA2P01563 188 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 T-ENOLP0DO92 83 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 ATP6V1B1P15313 513 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 HOXC13P31276 330 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 CIITAP33076 1130 aa2.83□□□□□ -1.96
HMGB1P24-202ENST00000615653 GRK5P34947 590 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms