RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 NEDD8-MDP1E9PL57 170 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 SPECC1L-ADORA2AF8WAN1 911 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 J3KR12 359 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 KCNN4O15554 427 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 HOXC11O43248 304 aaPredicted RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 LAMTOR5O43504 91 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 SNAP91O60641 907 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 MAFKO60675 156 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 RAMP2O60895 175 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 ZMPSTE24O75844 475 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 CD160O95971 181 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 ITGAVP06756 1048 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 RHOXF2BP0C7M4 288 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 CHRNB1P11230 501 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 TYRP14679 529 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 IVDP26440 423 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 OR1E1P30953 314 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 CTHP32929 405 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 CD70P32970 193 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 CSKP41240 450 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 NDST2P52849 883 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 GNA12Q03113 381 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 WASHC5Q12768 1159 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 ZBTB17Q13105 803 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 MTAPQ13126 283 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 SERINC3Q13530 473 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 PTK6Q13882 451 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 PDK1Q15118 436 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 TRIP13Q15645 432 aaPredicted RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 ERCC6LQ2NKX8 1250 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 MPP7Q5T2T1 576 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 RNF219Q5W0B1 726 aaPredicted RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 C8orf74Q6P047 294 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 DARS2Q6PI48 645 aaKnown RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 LEKR1Q6ZMV7 388 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 RALGPS2Q86X27 583 aaPredicted RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 CDKL3Q8IVW4 592 aaPredicted RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 MFN1Q8IWA4 741 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 APCDD1Q8J025 514 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 ATPAF2Q8N5M1 289 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 KIAA1958Q8N8K9 716 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 NAT16Q8N8M0 369 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 FAM71DQ8N9W8 422 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 ATL2Q8NHH9 583 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 TTC8Q8TAM2 541 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 USP33Q8TEY7 942 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 TFB1MQ8WVM0 346 aaKnown RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 NELL1Q92832 810 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 OTUB2Q96DC9 234 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 RTP4Q96DX8 246 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 CCDC114Q96M63 670 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 PNKPQ96T60 521 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 RHOXF2Q9BQY4 288 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 IER2Q9BTL4 223 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 BBS2Q9BXC9 721 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 CEP41Q9BYV8 373 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 ANKZF1Q9H8Y5 726 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 LMAN1LQ9HAT1 526 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 PDFQ9HBH1 243 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 PRMT8Q9NR22 394 aaPredicted RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 HOMER3Q9NSC5 361 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 GTSE1Q9NYZ3 720 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 NDRG2Q9UN36 371 aaKnown RBP8.21□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF148Q9UQR1 794 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 RAD54BQ9Y620 910 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 R4GN57 208 aa8.21□□□□□ -1.1
PCDH9-205ENST00000614931 PIEZO1Q92508 2521 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ESYT3A0FGR9 886 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ILVBLA1L0T0 632 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ANTXRLA6NF34 631 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 FAM187AA6NFU0 413 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ARHGAP42A6NI28 874 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 F5H423 210 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 H0Y626 953 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 SGK1O00141 431 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 KCNK1O00180 336 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 SLC9A3R1O14745 358 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 PPP1R12AO14974 1030 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CTIFO43310 598 aaKnown RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CACNG3O60359 315 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 PRAMEF11O60813 436 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 HEXIM1O94992 359 aaKnown RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ECEL1O95672 775 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 KRT14P02533 472 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CYBBP04839 570 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ADH5P11766 374 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CCNCP24863 283 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 PTPN3P26045 913 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 HLA-FP30511 346 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 RPL22P35268 128 aaKnown RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 SLC6A11P48066 632 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 SOX9P48436 509 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 VPS41P49754 854 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CLCN6P51797 869 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 YBEYP58557 167 aaPredicted RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 DR1Q01658 176 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 CSTF1Q05048 431 aaKnown RBP8.2□□□□□ -1.1
PCDH9-205ENST00000614931 AP1B1Q10567 949 aa8.2□□□□□ -1.1
PCDH9-205ENST00000614931 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms