RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 PPLO60437 1756 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 LOC100506127A0A0U1RQW1 187 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 MTRF1O75570 445 aaKnown RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ZBTB7AO95365 584 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 NEK3P51956 506 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CREMQ03060 361 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 TRIM32Q13049 653 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 GRB10Q13322 594 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 PDIA6Q15084 440 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 TYW3Q6IPR3 259 aaKnown RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ISLR2Q6UXK2 745 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CASP12Q6UXS9 341 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SH3RF1Q7Z6J0 888 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ZNF410Q86VK4 478 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 OOSP2Q86WS3 158 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CACTIN-AS1Q8N1I8 211 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 RNF148Q8N7C7 305 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 OR8H1Q8NGG4 311 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SPIRE2Q8WWL2 714 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 TBCBQ99426 244 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SIK3Q9Y2K2 1263 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CLUHO75153 1309 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 FAM220BPB1ANY3 271 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 F5H5T6 163 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ZW10O43264 779 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SNRPB2P08579 225 aaKnown RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 PORP16435 677 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 GRIA3P42263 894 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ARL4DP49703 201 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ACOT2P49753 483 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 BACE1P56817 501 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 EN1Q05925 392 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CDC16Q13042 620 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ATP13A5Q4VNC0 1218 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 DENND5BQ6ZUT9 1274 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 RASGEF1CQ8N431 466 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 FIG4Q92562 907 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SLC5A5Q92911 643 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 MBOAT7Q96N66 472 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 IRF2BPLQ9H1B7 796 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 EBF3Q9H4W6 596 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ADAM28Q9UKQ2 775 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 RIMBP3CA6NJZ7 1639 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 RIMBP3BA6NNM3 1639 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 RIMBP3Q9UFD9 1639 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SALL3Q9BXA9 1300 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 PEX11AO75192 247 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 PARNO95453 639 aaKnown RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CRTAMO95727 393 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SERPINA1P01009 418 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 YES1P07947 543 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 C6orf222P0C671 652 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 PRIM2P49643 509 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 HSF2Q03933 536 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 TGM3Q08188 693 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 BST1Q10588 318 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SMU1Q2TAY7 513 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 KHDRBS2Q5VWX1 349 aaKnown RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CDC73Q6P1J9 531 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ZNF572Q7Z3I7 529 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 TBC1D21Q8IYX1 336 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 GLT1D1Q96MS3 346 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 MNTQ99583 582 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 DEFB129Q9H1M3 183 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 TRPV5Q9NQA5 729 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 RAD18Q9NS91 495 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 LIMD1Q9UGP4 676 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 EVLQ9UI08 416 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CDH22Q9UJ99 828 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 RIMS1Q86UR5 1692 aaKnown RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 DHRS12A0PJE2 317 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 HACD1B0YJ81 288 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 PSMD11O00231 422 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 VAPBO95292 243 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 H6PDO95479 791 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 LINGO3P0C6S8 592 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 FGFR2P21802 821 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SSTR1P30872 391 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 PBX1P40424 430 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 GNG2P59768 71 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 GMFBP60983 142 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 MOGQ16653 247 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ZNF423Q2M1K9 1284 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 FAXCQ5TGI0 409 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 WDR59Q6PJI9 974 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 XKRXQ6PP77 449 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 PROSER1Q86XN7 944 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ZNF540Q8NDQ6 660 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 FAM172AQ8WUF8 416 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 TEKT5Q96M29 485 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 ZNF512Q96ME7 567 aaPredicted RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 C7orf26Q96N11 449 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 CADM1Q9BY67 442 aaKnown RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 YTHDF1Q9BYJ9 559 aaKnown RBP6.97□□□□□ -1.29
CLCN3-211ENST00000613795 RIOX1Q9H6W3 641 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 SYTL2Q9HCH5 934 aa6.97□□□□□ -1.29
CLCN3-211ENST00000613795 FAM205AQ6ZU69 1335 aa6.96□□□□□ -1.29
CLCN3-211ENST00000613795 AK9Q5TCS8 1911 aa6.96□□□□□ -1.29
CLCN3-211ENST00000613795 A0A0G2JPF8 293 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms