RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ATP11CQ8NB49 1132 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 C18orf8Q96DM3 657 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 TUBGCP2Q9BSJ2 902 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 PREBQ9HCU5 417 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 VPS51Q9UID3 782 aa18.22■□□□□ 0.51
SSBP1-215ENST00000612337 FARP1Q9Y4F1 1045 aaPredicted RBP18.22■□□□□ 0.51
SSBP1-215ENST00000612337 FASNP49327 2511 aaKnown RBP18.21■□□□□ 0.51
SSBP1-215ENST00000612337 PRAMEF26H0Y7S4 382 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 BNIP3LO60238 219 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 SNAP91O60641 907 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 RFPL3O75679 317 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 CTSLP07711 333 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 ERCC5P28715 1186 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-215ENST00000612337 ACADVLP49748 655 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 CLCN6P51797 869 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 TAS2R38P59533 333 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 DEUP1Q05D60 604 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 BNIP3Q12983 259 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 STAT4Q14765 748 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 COL28A1Q2UY09 1125 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 FAM102AQ5T9C2 384 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-215ENST00000612337 PIP5KL1Q5T9C9 394 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 KLHDC7AQ5VTJ3 777 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 LRRC31Q6UY01 552 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 KANSL1Q7Z3B3 1105 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 ERICH1Q86X53 443 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 XYLT1Q86Y38 959 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 TMIEQ8NEW7 156 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 OR2A12Q8NGT7 310 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 TSC1Q92574 1164 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 CCDC114Q96M63 670 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 TBCBQ99426 244 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 CLSTN2Q9H4D0 955 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 SCUBE2Q9NQ36 999 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 SNX10Q9Y5X0 201 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 FHOD1Q9Y613 1164 aa18.21■□□□□ 0.51
SSBP1-215ENST00000612337 IGLV3-10A0A075B6K4 115 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 A0A0D9SEW6 157 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 RNGTTO60942 597 aaKnown RBP18.2■□□□□ 0.5
SSBP1-215ENST00000612337 RRM1P23921 792 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 CHRNA3P32297 505 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 CCDC15Q0P6D6 951 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 KCNMA1Q12791 1236 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 DPCR1Q3MIW9 517 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 C6orf118Q5T5N4 469 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 NEK5Q6P3R8 708 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 DCAF4L2Q8NA75 395 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 NAA15Q9BXJ9 866 aaKnown RBP18.2■□□□□ 0.5
SSBP1-215ENST00000612337 MPP6Q9NZW5 540 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 DOCK4Q8N1I0 1966 aa18.2■□□□□ 0.5
SSBP1-215ENST00000612337 K7ERQ8 282 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 SMAD6O43541 496 aaKnown RBP18.19■□□□□ 0.5
SSBP1-215ENST00000612337 LSM8O95777 96 aaKnown RBP18.19■□□□□ 0.5
SSBP1-215ENST00000612337 PRNPP04156 253 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 HNF1BP35680 557 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 FLT3P36888 993 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 HSP90AA4PQ58FG1 418 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 TAF3Q5VWG9 929 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 BNIPLQ7Z465 357 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 TFAP2DQ7Z6R9 452 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 PDZD3Q86UT5 571 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 TMEM145Q8NBT3 493 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 HAPLN3Q96S86 360 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 TMPRSS4Q9NRS4 437 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 DACH1Q9UI36 760 aa18.19■□□□□ 0.5
SSBP1-215ENST00000612337 KPNA3O00505 521 aaPredicted RBP18.18■□□□□ 0.5
SSBP1-215ENST00000612337 JUPP14923 745 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 UCHL3P15374 230 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 OR1E1P30953 314 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 ILKQ13418 452 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 ARTNQ5T4W7 220 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 C22orf39Q6P5X5 142 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 ZNF783Q6ZMS7 281 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 ARCQ7LC44 396 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 CHST14Q8NCH0 376 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 MSANTD4Q8NCY6 345 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 HNRNPLLQ8WVV9 542 aaKnown RBP18.18■□□□□ 0.5
SSBP1-215ENST00000612337 ARRDC3Q96B67 414 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 KLHDC7BQ96G42 594 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 DYRK4Q9NR20 520 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 TMEM59LQ9UK28 342 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 CA5BQ9Y2D0 317 aa18.18■□□□□ 0.5
SSBP1-215ENST00000612337 A0A1W2PQU0 124 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 ILVBLA1L0T0 632 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 PES1O00541 588 aaKnown RBP18.17■□□□□ 0.5
SSBP1-215ENST00000612337 SRGAP2O75044 1071 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 CLDN6P56747 220 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 COL9A2Q14055 689 aaPredicted RBP18.17■□□□□ 0.5
SSBP1-215ENST00000612337 ZNF284Q2VY69 593 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 C2CD6Q53TS8 623 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 TRNP1Q6NT89 227 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 LINGO4Q6UY18 593 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 ERN2Q76MJ5 926 aaKnown RBP18.17■□□□□ 0.5
SSBP1-215ENST00000612337 NOP9Q86U38 636 aaKnown RBP18.17■□□□□ 0.5
SSBP1-215ENST00000612337 HORMAD1Q86X24 394 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 OR7D4Q8NG98 312 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 HDAC8Q9BY41 377 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 STK33Q9BYT3 514 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 CHMP5Q9NZZ3 219 aa18.17■□□□□ 0.5
SSBP1-215ENST00000612337 ZNF212Q9UDV6 495 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms