RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 OTUD3Q5T2D3 398 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 LPCAT4Q643R3 524 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 MIB1Q86YT6 1006 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 SVOPQ8N4V2 548 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 FNDC5Q8NAU1 212 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 FAM81AQ8TBF8 368 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 SERAC1Q96JX3 654 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 MARK4Q96L34 752 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 BTBD9Q96Q07 612 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZCWPW1Q9H0M4 648 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 IMPAD1Q9NX62 359 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 DLGAP3O95886 979 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PTPN1P18031 435 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 HOXD13P35453 343 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 GRIA3P42263 894 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PLK1P53350 603 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 EEF1DP3Q658K8 133 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 P2RY11Q96G91 374 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 FAXDC2Q96IV6 333 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 NDNQ99608 321 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 C1orf50Q9BV19 199 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 ELOVL4Q9GZR5 314 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 C12orf65Q9H3J6 166 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZSCAN9O15535 394 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 ZBTB24O43167 697 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PEX11AO75192 247 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 OCM2P0CE71 109 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 OCMP0CE72 109 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 MSH3P20585 1137 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 SOX6P35712 828 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 TRIM60Q495X7 471 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PPP1R26Q5T8A7 1209 aaPredicted RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 SH3BP5LQ7L8J4 393 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PIGZQ86VD9 579 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 FAM136AQ96C01 138 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 CLPTM1LQ96KA5 538 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 PLGRKTQ9HBL7 147 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 APOBEC3GQ9HC16 384 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 TMEM161AQ9NX61 479 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 XPR1Q9UBH6 696 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 DERAQ9Y315 318 aa11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 COL14A1Q05707 1796 aaKnown RBP11.07□□□□□ -0.64
CDC42EP3-206ENST00000611976 SNAP91O60641 907 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 RAMP2O60895 175 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 GCATO75600 419 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 KRT75O95678 551 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CST3P01034 146 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 VAC14Q08AM6 782 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 EFEMP1Q12805 493 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 USP4Q13107 963 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 NFE2Q16621 373 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 FAM45BPQ6NSW5 357 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CPNE8Q86YQ8 564 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 SLC35B2Q8TB61 432 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 FAM45AQ8TCE6 357 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 C18orf25Q96B23 403 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 TCF12Q99081 682 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 EXOSC4Q9NPD3 245 aaKnown RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 DAPK2Q9UIK4 370 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 C1orf232A0A0U1RR37 186 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 B4GALT5O43286 388 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 FARP2O94887 1054 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 USP17L7P0C7H9 530 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 COL6A2P12110 1019 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 ITGALP20701 1170 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 GRM5P41594 1212 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CCNG1P51959 295 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 IL5RAQ01344 420 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 RFWD3Q6PCD5 774 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 ABRAXAS1Q6UWZ7 409 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CMC1Q7Z7K0 106 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 STK32CQ86UX6 486 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 RELL1Q8IUW5 271 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 FAM126BQ8IXS8 530 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 ITFG1Q8TB96 612 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 FIG4Q92562 907 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CASP10Q92851 521 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CSPG4P5Q96PW8 444 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 DPY30Q9C005 99 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 RHOJQ9H4E5 214 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 TAS2R1Q9NYW7 299 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 MPP6Q9NZW5 540 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 COL20A1Q9P218 1284 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 WRAP73Q9P2S5 460 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 PACSIN3Q9UKS6 424 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 SPDYE5A6NIY4 337 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 SYNCRIPO60506 623 aaKnown RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 KATNA1O75449 491 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 CCDC166P0CW27 439 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 GTF2A2P52657 109 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 ATP1A4Q13733 1029 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 ARHGEF7Q14155 803 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 TAF1CQ15572 869 aaPredicted RBP11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 SPDYE7PQ495Y7 208 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 TMEM26Q6ZUK4 368 aa11.06□□□□□ -0.64
CDC42EP3-206ENST00000611976 HPS6Q86YV9 775 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms