RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHMP4A-211ENST00000609024 TDRD6O60522 2096 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 ATMQ13315 3056 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 K7ENP7 123 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 RNF225M0QZC1 329 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 PRNPP04156 253 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 KRT5P13647 590 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 CHRNA3P32297 505 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 FMO5P49326 533 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 CLDN2P57739 230 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 TAS2R38P59533 333 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 CDKN3Q16667 212 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 PIP5KL1Q5T9C9 394 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 KIAA1614Q5VZ46 1190 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 CXorf57Q6NSI4 855 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 INO80CQ6PI98 192 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 IGF2-ASQ6U949 168 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 RBM44Q6ZP01 1051 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 EFL1Q7Z2Z2 1120 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 SH2D3CQ8N5H7 860 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 SNRNP27Q8WVK2 155 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 GLMNQ92990 594 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 SLC35C1Q96A29 364 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 SLC46A1Q96NT5 459 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 ZSWIM1Q9BR11 485 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 DDIT4Q9NX09 232 aa17.79■□□□□ 0.44
CHMP4A-211ENST00000609024 NEBLO76041 1014 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 CALCAP01258 141 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 PRCPP42785 496 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 GPD2P43304 727 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 ZNF284Q2VY69 593 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 CCDC40Q4G0X9 1142 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 FBXL22Q6P050 247 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 RRAGAQ7L523 313 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 TMIEQ8NEW7 156 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 ATXN7L3BQ96GX2 97 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 IL12RB2Q99665 862 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 ARHGAP9Q9BRR9 750 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 C2orf49Q9BVC5 232 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 THAP9Q9H5L6 903 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 SYNDIG1Q9H7V2 258 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 VANGL2Q9ULK5 521 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 HS3ST3A1Q9Y663 406 aa17.78■□□□□ 0.44
CHMP4A-211ENST00000609024 DOCK9Q9BZ29 2069 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 CLDN11O75508 207 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 ZNF202O95125 648 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 TGM2P21980 687 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 RPIAP49247 311 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 CENPCQ03188 943 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 LRRC63Q05C16 580 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 PKP1Q13835 747 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 NR0B2Q15466 257 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 ANKRD40Q6AI12 368 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 OR6B2Q6IFH4 312 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 GCNT7Q6ZNI0 430 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 ERN2Q76MJ5 926 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 PARGQ86W56 976 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 ZNF548Q8NEK5 533 aaPredicted RBP17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 STK32AQ8WU08 396 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 ARRDC3Q96B67 414 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 NOX5Q96PH1 765 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 PRMT1Q99873 361 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 SRRTQ9BXP5 876 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 PCDHGA8Q9Y5G5 932 aa17.77■□□□□ 0.44
CHMP4A-211ENST00000609024 E5RJQ4 531 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 CSF2P04141 144 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 RHOCP08134 193 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 GIMD1P0DJR0 217 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 SRCP12931 536 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 RABIFP47224 123 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 CSRP3P50461 194 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 RPS21P63220 83 aaKnown RBP17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 SGCGQ13326 291 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 STIM1Q13586 685 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 AUHQ13825 339 aaKnown RBP17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 ZNF658Q5TYW1 1059 aaPredicted RBP17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 ABI3BPQ7Z7G0 1075 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 SLC22A18ASQ8N1D0 253 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 WDR36Q8NI36 951 aaKnown RBP17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 GRIN3AQ8TCU5 1115 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 KAT5Q92993 513 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 SNX21Q969T3 373 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 FEM1CQ96JP0 617 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 SLC4A5Q9BY07 1137 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 SLC17A9Q9BYT1 436 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 IL36AQ9UHA7 158 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 CSNK1G3Q9Y6M4 447 aa17.76■□□□□ 0.43
CHMP4A-211ENST00000609024 FAM237AA0A1B0GTK4 181 aa17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 FPGTO14772 594 aa17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 AQP9O43315 295 aa17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 TCEA3O75764 348 aa17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 TNFSF15O95150 251 aa17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 LETM1O95202 739 aaPredicted RBP17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 SMC2O95347 1197 aa17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 IGLV3-25P01717 112 aa17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 CTSLP07711 333 aa17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 NME1P15531 152 aaKnown RBP17.75■□□□□ 0.43
CHMP4A-211ENST00000609024 MLLT3P42568 568 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms