RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RRM1P23921 792 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 CHRNA3P32297 505 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 HNF1BP35680 557 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 DRAP1Q14919 205 aaPredicted RBP13.48□□□□□ -0.25
RPS28-204ENST00000602140 VWA3BQ502W6 1294 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 HSP90AA4PQ58FG1 418 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 FAM102AQ5T9C2 384 aaPredicted RBP13.48□□□□□ -0.25
RPS28-204ENST00000602140 PIP5KL1Q5T9C9 394 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 DPY19L2P1Q6NXN4 242 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 LRRC31Q6UY01 552 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 LINGO4Q6UY18 593 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 KANSL1Q7Z3B3 1105 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 TFAP2DQ7Z6R9 452 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 SETD3Q86TU7 594 aaPredicted RBP13.48□□□□□ -0.25
RPS28-204ENST00000602140 FAM114A1Q8IWE2 563 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 OR2A12Q8NGT7 310 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 TSC1Q92574 1164 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 KLK6Q92876 244 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 NT5C3BQ969T7 300 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 C18orf8Q96DM3 657 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 PGAP3Q96FM1 320 aaPredicted RBP13.48□□□□□ -0.25
RPS28-204ENST00000602140 KLHDC7BQ96G42 594 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 CCDC114Q96M63 670 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 TBCBQ99426 244 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 MYOCQ99972 504 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 PREBQ9HCU5 417 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 TMPRSS4Q9NRS4 437 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 MPP6Q9NZW5 540 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
RPS28-204ENST00000602140 GOLGA4Q13439 2230 aaKnown RBP13.48□□□□□ -0.25
RPS28-204ENST00000602140 ACACAQ13085 2346 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 A0A0D9SEW6 157 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 A0A1W2PQU0 124 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 DRGXA6NNA5 263 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
RPS28-204ENST00000602140 SLC31A1O15431 190 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 SMAD6O43541 496 aaKnown RBP13.47□□□□□ -0.25
RPS28-204ENST00000602140 CYP11B1P15538 503 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 PRLRP16471 622 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 CDH5P33151 784 aaPredicted RBP13.47□□□□□ -0.25
RPS28-204ENST00000602140 GABRB2P47870 512 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 KCNMA1Q12791 1236 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 TARDBPQ13148 414 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPS28-204ENST00000602140 SLC25A52Q3SY17 297 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 MIIPQ5JXC2 388 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 HES3Q5TGS1 186 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 TAF3Q5VWG9 929 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 ERICH1Q86X53 443 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 XYLT1Q86Y38 959 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 DCAF4L2Q8NA75 395 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 TMEM145Q8NBT3 493 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 CHST14Q8NCH0 376 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 TMIEQ8NEW7 156 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 ARRDC3Q96B67 414 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 C1orf74Q96LT6 269 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 TUBGCP2Q9BSJ2 902 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 TNKS2Q9H2K2 1166 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 DYRK4Q9NR20 520 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 FHOD1Q9Y613 1164 aa13.47□□□□□ -0.25
RPS28-204ENST00000602140 BAHCC1Q9P281 2608 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 IGLV3-10A0A075B6K4 115 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 A0A087WV48 116 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 GOLGA8SH3BPF8 625 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 RNF103O00237 685 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 SRGAP2O75044 1071 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 ENDOD1O94919 500 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 PRNPP04156 253 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 THEGLP0DJG4 465 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 CKMT2P17540 419 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 GLDCP23378 1020 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 OR1E1P30953 314 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 FLT3P36888 993 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 SCNN1AP37088 669 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 CLCN6P51797 869 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 CCDC15Q0P6D6 951 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 ACAP1Q15027 740 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 ZNF284Q2VY69 593 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 DPCR1Q3MIW9 517 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 SOWAHCQ53LP3 525 aaPredicted RBP13.46□□□□□ -0.25
RPS28-204ENST00000602140 ARSIQ5FYB1 569 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 NEK5Q6P3R8 708 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 FBXL19Q6PCT2 694 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 OR7D4Q8NG98 312 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 GRIN3AQ8TCU5 1115 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 NXPE2Q96DL1 559 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 SPON2Q9BUD6 331 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 FZD3Q9NPG1 666 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 IL36AQ9UHA7 158 aa13.46□□□□□ -0.25
RPS28-204ENST00000602140 IGSF10Q6WRI0 2623 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 SIGLEC6O43699 453 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 PCDH8O95206 1070 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 AKT2P31751 481 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 RECQLP46063 649 aaPredicted RBP13.45□□□□□ -0.26
RPS28-204ENST00000602140 SEMG2Q02383 582 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 ILKQ13418 452 aa13.45□□□□□ -0.26
RPS28-204ENST00000602140 PROX2Q3B8N5 592 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms