RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 TKTL2Q9H0I9 626 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 ZNF408Q9H9D4 720 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 SSX2IPQ9Y2D8 614 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 ZNF236Q9UL36 1845 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 CEP350Q5VT06 3117 aa20.59■□□□□ 0.89
SHKBP1-225ENST00000600733 LRIG2O94898 1065 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 FESP07332 822 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 GLDCP23378 1020 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 EPHX2P34913 555 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 AVPR1AP37288 418 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 NPY2RP49146 381 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 CSE1LP55060 971 aaKnown RBP20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 ITPRIPL1Q6GPH6 555 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 USP33Q8TEY7 942 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 SREK1Q8WXA9 508 aaKnown RBP20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 JADE3Q92613 823 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 TEKT5Q96M29 485 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 ILKAPQ9H0C8 392 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 WDCPQ9H6R7 721 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 CNGB3Q9NQW8 809 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 TRHDEQ9UKU6 1024 aa20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 G3BP2Q9UN86 482 aaKnown RBP20.58■□□□□ 0.89
SHKBP1-225ENST00000600733 C9IYK1 514 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 SBK3P0C264 359 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 GNAT1P11488 350 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 EPHA3P29320 983 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 GJA9P57773 515 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 ARL13BQ3SXY8 428 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 PPM1LQ5SGD2 360 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 TMEM151AQ8N4L1 468 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 BRI3BPQ8WY22 251 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 PPP2R3CQ969Q6 453 aa20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 TSPYL2Q9H2G4 693 aaPredicted RBP20.58■□□□□ 0.88
SHKBP1-225ENST00000600733 MAGEB16A2A368 324 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 MTSS1O43312 755 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 RAG1P15918 1043 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 GRIA4P48058 902 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 AQP4P55087 323 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 MTTPP55157 894 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 ANO4Q32M45 955 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 EP400NLQ6ZTU2 488 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 ZC3HC1Q86WB0 502 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 CNTD1Q8N815 330 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 ZSCAN18Q8TBC5 510 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 GDPD5Q8WTR4 605 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 TSPAN18Q96SJ8 248 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 GPR22Q99680 433 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 RTKNQ9BST9 563 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 C1QTNF1Q9BXJ1 281 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 GNEQ9Y223 722 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 MATN2O00339 956 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 AIM2O14862 343 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 CAPN15O75808 1086 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 PRDX6P30041 224 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 NUMBP49757 651 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 CDH17Q12864 832 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 MSLNQ13421 630 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 HNRNPDQ14103 355 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 RAB41Q5JT25 222 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 USP50Q70EL3 339 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 BHLHA9Q7RTU4 235 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 TLK2Q86UE8 772 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 SPATA22Q8NHS9 363 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 PGAP3Q96FM1 320 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 EPAS1Q99814 870 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 SPATS2LQ9NUQ6 558 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 PDP2Q9P2J9 529 aa20.57■□□□□ 0.88
SHKBP1-225ENST00000600733 PSEN2P49810 448 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 NUDT2P50583 147 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 ZNF460Q14592 562 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 USP10Q14694 798 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 ARL13AQ5H913 290 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 METTL21CQ5VZV1 264 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 OLFML2BQ68BL8 750 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 ARHGAP36Q6ZRI8 547 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 PLEKHH3Q7Z736 793 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 C3orf58Q8NDZ4 430 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 DPF3Q92784 378 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 BRD8Q9H0E9 1235 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 PAPOLBQ9NRJ5 636 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 TLK1Q9UKI8 766 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 HHLA1C9JL84 531 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 H3BNX3 289 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 AHCYL1O43865 530 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 PIGNO95427 931 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 PIK3R1P27986 724 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 GABRB3P28472 473 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 CSRP3P50461 194 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 CLCNKBP51801 687 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 CRYBB1P53674 252 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 NAGLUP54802 743 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 TRIP10Q15642 601 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 LSM12Q3MHD2 195 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 INTS6LQ5JSJ4 861 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 LIPMQ5VYY2 423 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 ZYG11AQ6WRX3 759 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 SNX32Q86XE0 403 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 ZC3H15Q8WU90 426 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 KCTD4Q8WVF5 259 aa20.56■□□□□ 0.88
SHKBP1-225ENST00000600733 SCYL1Q96KG9 808 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms