RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 PRR23CQ6ZRP0 262 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 VASH2Q86V25 355 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SGMS1Q86VZ5 419 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 ZNF679Q8IYX0 411 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SLC7A5P1Q8MH63 180 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 MINDY1Q8N5J2 469 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 CCDC155Q8N6L0 562 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 CDYL2Q8N8U2 506 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 EIF1ADQ8N9N8 165 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 FSIP1Q8NA03 581 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 OR8K5Q8NH50 307 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SMARCC2Q8TAQ2 1214 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 ACMSDQ8TDX5 336 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 CHURC1Q8WUH1 139 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SYN2Q92777 582 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 HOXB13Q92826 284 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 PEX13Q92968 403 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 EXT2Q93063 718 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SMARCE1Q969G3 411 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 C11orf24Q96F05 449 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 SCARF2Q96GP6 870 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 ARL5BQ96KC2 179 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 PAFAH2Q99487 392 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 RAD9AQ99638 391 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 HNRNPABQ99729 332 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 PKP2Q99959 881 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SRSF8Q9BRL6 282 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 NUP85Q9BW27 656 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 MRPL1Q9BYD6 325 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 ZNF341Q9BYN7 854 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 TINAGL1Q9GZM7 467 aaPredicted RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 MTG2Q9H4K7 406 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 HAUS4Q9H6D7 363 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 LRRC40Q9H9A6 602 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 UNKLQ9H9P5 680 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 POLR1BQ9H9Y6 1135 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 ZBTB26Q9HCK0 441 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 FBRSL1Q9HCM7 1045 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 SLC6A20Q9NP91 592 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 RAB20Q9NX57 234 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 ALKBH4Q9NXW9 302 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 KLHL14Q9P2G3 628 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 TRPC4Q9UBN4 977 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 GULP1Q9UBP9 304 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 DNAJB11Q9UBS4 358 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 USP21Q9UK80 565 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 CAPN11Q9UMQ6 739 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SLC6A14Q9UN76 642 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SNX14Q9Y5W7 946 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 SPACA6W5XKT8 324 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 KIF7Q2M1P5 1343 aa5.41□□□□□ -1.54
PAF1-208ENST00000598594 MYBBP1AQ9BQG0 1328 aaKnown RBP5.41□□□□□ -1.54
PAF1-208ENST00000598594 A0A087WWL8 130 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 SERTM2A0A1B0GWG4 89 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 A0A1B0GWJ7 208 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 OOEPA6NGQ2 149 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 GNAT3A8MTJ3 354 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 A8MZ25 164 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 NDUFS8O00217 210 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 PSMD9O00233 223 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 E2F3O00716 465 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 ARHGEF15O94989 841 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 KLKB1P03952 638 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 URODP06132 367 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 ANXA8P13928 327 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 COX7A2P14406 83 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 EPORP19235 508 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 TCEA1P23193 301 aaKnown RBP5.4□□□□□ -1.54
PAF1-208ENST00000598594 PTBP1P26599 531 aaKnown RBP eCLIP5.4□□□□□ -1.54
PAF1-208ENST00000598594 CCND2P30279 289 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 BMP8BP34820 402 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 CA8P35219 290 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 IL13P35225 146 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 BMI1P35226 326 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 PTGER3P43115 390 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 SLC11A2P49281 568 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 GPR15P49685 360 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 CCR3P51677 355 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 UCP3P55916 312 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 UBE2HP62256 183 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 NOMO3P69849 1222 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 SARNPP82979 210 aaKnown RBP5.4□□□□□ -1.54
PAF1-208ENST00000598594 ROM1Q03395 351 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 ITIH3Q06033 890 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 TNK2Q07912 1038 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 HNRNPDQ14103 355 aaKnown RBP5.4□□□□□ -1.54
PAF1-208ENST00000598594 KCNAB1Q14722 419 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 NOLC1Q14978 699 aaKnown RBP eCLIP5.4□□□□□ -1.54
PAF1-208ENST00000598594 RRS1Q15050 365 aaKnown RBP5.4□□□□□ -1.54
PAF1-208ENST00000598594 SGCBQ16585 318 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 TAZQ16635 292 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 ERCC6LQ2NKX8 1250 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 IGSF11Q5DX21 431 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 PRRT3Q5FWE3 981 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 SPATA46Q5T0L3 261 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 ANXA8L1Q5VT79 327 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 ANKRD40Q6AI12 368 aa5.4□□□□□ -1.54
PAF1-208ENST00000598594 KIAA0930Q6ICG6 404 aaPredicted RBP5.4□□□□□ -1.54
PAF1-208ENST00000598594 NEK5Q6P3R8 708 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms