RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CLDN11O75508 207 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 MYF5P13349 255 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 ZNF18P17022 549 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 BMP6P22004 513 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 HNRNPA2B1P22626 353 aaKnown RBP10.22□□□□□ -0.77
LIG1-209ENST00000596104 GNA15P30679 374 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 AKT2P31751 481 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 CHRNA3P32297 505 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 LSSP48449 732 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 CLDN2P57739 230 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 GABREP78334 506 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 ZNF177Q13360 481 aaPredicted RBP10.22□□□□□ -0.77
LIG1-209ENST00000596104 TMEM259Q4ZIN3 620 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 OTUD1Q5VV17 481 aaPredicted RBP10.22□□□□□ -0.77
LIG1-209ENST00000596104 SEL1L3Q68CR1 1132 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 TMC6Q7Z403 805 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 ZNF683Q8IZ20 524 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 LSMEM2Q8N112 164 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 WDTC1Q8N5D0 677 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 FAM181AQ8N9Y4 354 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 IFT43Q96FT9 208 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 WBP1Q96G27 269 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 APOLD1Q96LR9 279 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 DEPDC7Q96QD5 511 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 CPXM1Q96SM3 734 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 CALN1Q9BXU9 219 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 ASCL3Q9NQ33 180 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 NLGN3Q9NZ94 848 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 COX16Q9P0S2 106 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 MAN1B1Q9UKM7 699 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 SSUH2Q9Y2M2 353 aa10.22□□□□□ -0.77
LIG1-209ENST00000596104 A0A1W2PNU3 283 aaPredicted RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 I6L893 689 aaPredicted RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 J3QKU1 62 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 K7ESM1 405 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 KPNA3O00505 521 aaPredicted RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 SCAMP1O15126 338 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 THAP12O43422 761 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 SMAD6O43541 496 aaKnown RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 HSF2BPO75031 334 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 USP12O75317 370 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 CSO75390 466 aaKnown RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 PAGE1O75459 146 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 GRAP2O75791 330 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 CNTN5O94779 1100 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 AFPP02771 609 aaKnown RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 GP1BAP07359 652 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 ALPPL2P10696 532 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 PPP1R2P41236 205 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 UCNP55089 124 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 CDH4P55283 916 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 MARSP56192 900 aaKnown RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 TMPRSS3P57727 454 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 ERVPABLB-1P60509 514 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 RHDQ02161 417 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 MTA1Q13330 715 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 STIM1Q13586 685 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 FGL2Q14314 439 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 ALFQ53S48 1182 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 HS1BP3Q53T59 392 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 ARTNQ5T4W7 220 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 ISM2Q6H9L7 571 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 KLHL10Q6JEL2 608 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 OLFML1Q6UWY5 402 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 CHST14Q8NCH0 376 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 TMIEQ8NEW7 156 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 SNRNP27Q8WVK2 155 aaKnown RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 RNF34Q969K3 372 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 BMFQ96LC9 184 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 SEMA4CQ9C0C4 833 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 POLR1BQ9H9Y6 1135 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 CPNE5Q9HCH3 593 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 UBE2TQ9NPD8 197 aaPredicted RBP10.21□□□□□ -0.77
LIG1-209ENST00000596104 ANLNQ9NQW6 1124 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 VPS51Q9UID3 782 aa10.21□□□□□ -0.77
LIG1-209ENST00000596104 TP53BP1Q12888 1972 aaPredicted RBP10.21□□□□□ -0.78
LIG1-209ENST00000596104 CAPN8A6NHC0 703 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 A6NNZ2 444 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 NEBLO76041 1014 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 PRNPP04156 253 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 RRM1P23921 792 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 CLCN6P51797 869 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 HNRNPKP61978 463 aaKnown RBP eCLIP10.2□□□□□ -0.78
LIG1-209ENST00000596104 KRT83P78385 493 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 SKOR1P84550 965 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 CCDC15Q0P6D6 951 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 NME3Q13232 169 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 FZD2Q14332 565 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 ISXQ2M1V0 245 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 TAF1BQ53T94 588 aaPredicted RBP10.2□□□□□ -0.78
LIG1-209ENST00000596104 ZNF542PQ5EBM4 170 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 EFHC1Q5JVL4 640 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 ARHGAP40Q5TG30 622 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 BROXQ5VW32 411 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 OR6B2Q6IFH4 312 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 C22orf39Q6P5X5 142 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 GJB7Q6PEY0 223 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 IGF2-ASQ6U949 168 aa10.2□□□□□ -0.78
LIG1-209ENST00000596104 KYAT3Q6YP21 454 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms