RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 IL9RQ01113 521 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 SUZ12Q15022 739 aaKnown RBP13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 ARL13BQ3SXY8 428 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 AGBL4Q5VU57 503 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 PNPLA1Q8N8W4 532 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 OR2A12Q8NGT7 310 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 RHBDD1Q8TEB9 315 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 FAM131CQ96AQ9 280 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 SKA1Q96BD8 255 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 SERAC1Q96JX3 654 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 CCDC114Q96M63 670 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 SELENOOQ9BVL4 669 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 TNKS2Q9H2K2 1166 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 ATP13A1Q9HD20 1204 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 ZNF212Q9UDV6 495 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 BTBD3Q9Y2F9 522 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 FARP1Q9Y4F1 1045 aaPredicted RBP13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 NEUROG3Q9Y4Z2 214 aa13.4□□□□□ -0.26
PRKCSH-218ENST00000593053 A0A1W2PR77 199 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 KPNA3O00505 521 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 PLRG1O43660 514 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 CALB1P05937 261 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 CTSLP07711 333 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 CD38P28907 300 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 MAT2AP31153 395 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 CHRNA3P32297 505 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 RFC1P35251 1148 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 CLCN6P51797 869 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 GNA12Q03113 381 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 ANO6Q4KMQ2 910 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 PRAMEF14Q5SWL7 426 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 RWDD4Q6NW29 188 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 C22orf39Q6P5X5 142 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 ZNF783Q6ZMS7 281 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 DBX2Q6ZNG2 339 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 STRADAQ7RTN6 431 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 RAB44Q7Z6P3 723 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 PHF13Q86YI8 300 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 CHST14Q8NCH0 376 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 FAM172AQ8WUF8 416 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 MAGEB5Q9BZ81 275 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 NAT10Q9H0A0 1025 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 KDM4CQ9H3R0 1056 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 PPARGC1AQ9UBK2 798 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 OR12D3Q9UGF7 316 aa13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 TPX2Q9ULW0 747 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 APOBEC2Q9Y235 224 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 MAP1BP46821 2468 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-218ENST00000593053 FAM72CH0Y354 149 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 TEX33O43247 280 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 LATO43561 262 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 ZMPSTE24O75844 475 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 FERP16591 822 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 GPD1P21695 349 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 ACVRL1P37023 503 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 RECQLP46063 649 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 HDAC4P56524 1084 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 GSCP56915 257 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 TAS2R38P59533 333 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 FAM72AQ5TYM5 149 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 MANEALQ5VSG8 457 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 NAPEPLDQ6IQ20 393 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 FAM72DQ6L9T8 149 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 RETSATQ6NUM9 610 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 MON1BQ7L1V2 547 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 GLRX5Q86SX6 157 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 PRPF39Q86UA1 669 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 SLCO6A1Q86UG4 719 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 FAM72BQ86X60 149 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 CCDC185Q8N715 623 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 C3orf20Q8ND61 904 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 BAHD1Q8TBE0 780 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 GRIN3AQ8TCU5 1115 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 CENPIQ92674 756 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 GATA6Q92908 595 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 ELF4Q99607 663 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 CDC6Q99741 560 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 TMEM121BQ9BXQ6 578 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 OSBPL2Q9H1P3 480 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 NDFIP2Q9NV92 336 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 ARHGAP20Q9P2F6 1191 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 MSRB2Q9Y3D2 182 aa13.38□□□□□ -0.27
PRKCSH-218ENST00000593053 A0A1B0GTQ1 180 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 SIGLEC16A6NMB1 481 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 TLR4O00206 839 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 RNF103O00237 685 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 PCDHGA12O60330 932 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 DFNA5O60443 496 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 LRIG2O94898 1065 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 PRNPP04156 253 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 PLEKP08567 350 aaPredicted RBP13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 ATXN1LP0C7T5 689 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 RHOQP17081 205 aa13.37□□□□□ -0.27
PRKCSH-218ENST00000593053 GRK6P43250 576 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms